Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00240 ATGTTCCCAAAGCCCCACCACCAACCACCGTCCCATTCTCAGCCTTTTCCCCGTTCCTTTCCCGTCACCGCCACTCCACCACCGAGAGATTCCCCCGATGACGATTCCGCCGCCGCCCCTTCCCCTCTCTCTCACGCCATCGTCCTTAAAGAACCGCCCGCCTCCGCCGACGGAGCTTCCATCGAGGTCGTCCGTCGCCCCCGTGGCCGTCCTCCTGGATCCAAGAACAAGCCAAAGCCAACGGCCGTCGTTGTCGCCGGCCGTGACGCCGAGCCGCCGATGAGTCCTTACGTTCTTGAAGTACCCGGCGGTAGCGATATCGTCGAAGCTATTTCCCGATTTTGCCGCCGCAGGAACACAGGGCTTTGTATTCTCAACGCTTACGGAACAGTCGGTGACGTCACTCTCCGGCAGCCGGCTTCGTCTTCGGTCGGTACCGTCACTTTCCATGGACGATTTGATATTCTTTCCGTTTGCGCTACCTTTGTTCCCCAAACGACGTCGTTTCCAATTCCTAACGGATTCACCATCACGCTAGCGGGACCACAGGGTCAGATCTTCGGCGGCTTGGTCGCCGGATCTTTAATCGGTGTTGGAACCGTCTACGTAATCGCCGCCTCGTTCAACAATCCATCGTATCAGCGGCTGCCGTCGGAGGACGAAGTCAGAAAATTAACATTCAGCGATGTGGAAGAAGCTCACTCTCCGATCTCCGGCGGGAAAGATAGCGAAAACACCGCCGCGGGTGGCGCCCCTGAGACTTGCGGTTTGCTGCCGATGTACAGCACTCACTCATCTTCGGACGTAATATGGACTCCGGCGGCCAGACAACCCCCGCCGCCGCATCACCATCGCCAGTACTAA 864 58.45 MFPKPHHQPPSHSQPFPRSFPVTATPPPRDSPDDDSAAAPSPLSHAIVLKEPPASADGASIEVVRRPRGRPPGSKNKPKPTAVVVAGRDAEPPMSPYVLEVPGGSDIVEAISRFCRRRNTGLCILNAYGTVGDVTLRQPASSSVGTVTFHGRFDILSVCATFVPQTTSFPIPNGFTITLAGPQGQIFGGLVAGSLIGVGTVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEAHSPISGGKDSENTAAGGAPETCGLLPMYSTHSSSDVIWTPAARQPPPPHHHRQY 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1892465 1893562 + MELO3C003526.2.1 Cme04g00240 324501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00240 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 220 - -
Cme04g00240 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 281 - -
Cme04g00240 287 MobiDBLite consensus disorder prediction 233 260 - -
Cme04g00240 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 210 IPR005175 -
Cme04g00240 287 CDD DUF296 96 208 IPR005175 -
Cme04g00240 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 281 IPR014476 GO:0003680
Cme04g00240 287 MobiDBLite consensus disorder prediction 1 28 - -
Cme04g00240 287 ProSiteProfiles PPC domain profile profile. 91 231 IPR005175 -
Cme04g00240 287 MobiDBLite consensus disorder prediction 1 82 - -
Cme04g00240 287 Gene3D - 95 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00240 Cme-Chr4:1892465 Cme10g00915 Cme-Chr10:6686355 9.92E-38 dispersed
Cme03g01795 Cme-Chr3:26405468 Cme04g00240 Cme-Chr4:1892465 6.61E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00240 - - zju:107421268 283.493