Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00274 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCTAAGCTTGCCGAGCAAGCTGAGCGTTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGATAACGAGGAACTCACTGTTGAGGAGCGGAACCTTCTTTCTGTTGCTTATAAGAATGTTATTGGAGCACGTAGAGCTTCCTGGAGGATTATTTCCTCTATTGAACAGAAAGAAGAGAGCCGAGGGAATGATGATCATGTCTCTGTCATCCGAGGTTATAGATCTAAGATCGAGACTGAGCTTTCTAACATTTGTGATGGCATCCTTAAACTTCTTGACTCTCGTCTTATTTCCTCTGCTGCTTCTGGTGATTCCAAGGTCTTTTATCTTAAGATGAAGGGCGATTATCATAGATACCTTGCTGAATTTAAGACCGGAGCTGAAAGGAAGGAAGCTGCCGAAAGTACGCTCACTGCTTATAAATCTGCTCAGGATATTGCAAATGCTGAACTTGCTCCTACGCACCCTATACGACTTGGGCTGGCCTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGTCTTGCTAAACAGGCTTTTGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCGTACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCAGATATGCAGGACGACGGAGATGAGATTAAAGAAGCAGCTCCCAAACGCGATGACGAATAG 777 45.43 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRGYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2168966 2172524 - MELO3C003562.2.1 Cme04g00274 324535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00274 258 PIRSF 14-3-3 2 250 IPR000308 -
Cme04g00274 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cme04g00274 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cme04g00274 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cme04g00274 258 Gene3D - 1 252 IPR036815 -
Cme04g00274 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cme04g00274 258 PANTHER 14-3-3 PROTEIN 4 253 IPR000308 -
Cme04g00274 258 Coils Coil 14 34 - -
Cme04g00274 258 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 4 253 - -
Cme04g00274 258 SMART 1433_4 8 250 IPR023410 -
Cme04g00274 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01852 Cme04g00274 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00247 Cme-Chr4:1948190 Cme04g00274 Cme-Chr4:2168966 4.32E-139 dispersed
Cme04g00274 Cme-Chr4:2168966 Cme07g01081 Cme-Chr7:13451281 4.33E-160 dispersed
Cme03g01852 Cme-Chr3:26800080 Cme04g00274 Cme-Chr4:2168966 9.53E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00274 K06630 - csv:101210822 498.049