Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00285 CGCGCCAATATTACACGTGTCAAGCGAAAAGCTTCCGAAACCCATGAGATCATTGTAACTCCCCGTGATAGTGCAAAATATCAATACAAAGACAACGAAGAACTCAGTCCAACGTCCATAGTCAAGAGTACAAGCCGAAGTACAAAAGCAGCAGCGGCAAATTCGAAGCCAAGATTTTCAGTTCCATTTGGAGAAGCGATGACGAAAGAGAGAGAACTACTCGTTTACTCTGCTAAATTGGCTGAACAAGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAACTTGCGAAGTTAAATGTGGAATTGACAGTGGACGAGAGAAATCTGCTATCTGTTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTCTGTCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAACGTGGAACGGATAATTGGTTACAGGCGTGGGGTTGAAGATGAGCTCTCTAAAATATGCAGTGATATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCCGCTGGAGAATCTACTGTGTTCTACCATAAGATGAAAGGAGACTACTGTCGGTATTTGGCTGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCGGATCAGTCATTAAAGTCTTACGAGGCAAGTTTATTTCCTGCTGCTTCTGCAATTGCTAACTCCGACTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCTAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAATGAGGAATCCTACAAGGACATTACCCTTATTATGCAGCTCCTTAGGGACAATCTAACTCTGTGGACATCCGATCTTGCAGACGAAGGCGGAGAGCAGTCCAATGCCGATGAACTTTAG 963 43.3 RANITRVKRKASETHEIIVTPRDSAKYQYKDNEELSPTSIVKSTSRSTKAAAANSKPRFSVPFGEAMTKERELLVYSAKLAEQAERYEEMVEEMKKLAKLNVELTVDERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIGYRRGVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEASLFPAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDITLIMQLLRDNLTLWTSDLADEGGEQSNADEL 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2243873 2249594 + MELO3C003572.2.1 Cme04g00285 324546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00285 320 Coils Coil 264 284 - -
Cme04g00285 320 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 68 319 - -
Cme04g00285 320 Pfam 14-3-3 protein 78 304 IPR023410 -
Cme04g00285 320 SMART 1433_4 71 317 IPR023410 -
Cme04g00285 320 PRINTS 14-3-3 protein zeta signature 250 276 IPR000308 -
Cme04g00285 320 PRINTS 14-3-3 protein zeta signature 183 205 IPR000308 -
Cme04g00285 320 PRINTS 14-3-3 protein zeta signature 103 132 IPR000308 -
Cme04g00285 320 PRINTS 14-3-3 protein zeta signature 152 176 IPR000308 -
Cme04g00285 320 PRINTS 14-3-3 protein zeta signature 277 306 IPR000308 -
Cme04g00285 320 Coils Coil 77 100 - -
Cme04g00285 320 Gene3D - 55 317 IPR036815 -
Cme04g00285 320 PANTHER 14-3-3 PROTEIN 68 319 IPR000308 -
Cme04g00285 320 ProSitePatterns 14-3-3 proteins signature 1. 109 119 IPR023409 -
Cme04g00285 320 SUPERFAMILY 14-3-3 protein 70 306 IPR036815 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01863 Cme04g00285 CCT
Cme03g01863 Cme04g00285 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00285 Cme-Chr4:2243873 Cme10g00363 Cme-Chr10:2337132 1.04E-134 dispersed
Cme03g01863 Cme-Chr3:26886991 Cme04g00285 Cme-Chr4:2243873 2.15E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00285 K06630 - csv:101213169 465.692