Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g00287 | ATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAATTGGGGCTCTTTGCTATTTATGATGGCCATTTAGGAGAAAGTGTTCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCTTGAAAGAGGAAGAGTTTTGGGTTGATCCCAACAGCTCCATCTCAAAAGCATATGAGAAGACGGATCAGGCGATTCTATCCCACAGCTCAGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATTTTGATTAATGGTCAAAGGCTATGGGTGGCCAATGTTGGAGATTCACGTGCAGTTCTTTCTAGAGGGGGTGAAGCTGTACAGATGACCATCGATCATGAGCCGAATACAAATACGGAACGACGAACCATTGAGAATAAAGGTGGCTTTGTTTCAAACATGCCAGGAGACGTACCTCGAGTAAACGGCCAGTTAGCAGTTTCACGAGCATTTGGAGACAAAAGTCTAAAATCTCACTTGCGATCTGATCCTGATATACGTGATATTAATGTAGATGCCAACACGGACATATTAATTCTTGCCAGCGATGGTCTATGGAAGGTCATGGCCAACCAAGAAGCAGTCGATATAGCACGAAGAATTAAAGACCCGCTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGGAGAAAGAGAGTAAAGATGACATTTCATGCATTGTGGTTAGATTTAGGTGA | 714 | 42.3 | MEDYHVAKFVQIQEHELGLFAIYDGHLGESVPAYLQKHLFSNILKEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSRGGEAVQMTIDHEPNTNTERRTIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDINVDANTDILILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALEKESKDDISCIVVRFR | 237 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 2251536 | 2254089 | - | MELO3C003574.2.1 | Cme04g00287 | 324548 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g00287 | 237 | SMART | PP2C_4 | 1 | 234 | IPR001932 | - | |
| Cme04g00287 | 237 | SMART | PP2C_SIG_2 | 4 | 236 | IPR001932 | - | |
| Cme04g00287 | 237 | PANTHER | PROTEIN PHOSPHATASE 2C 10-RELATED | 1 | 236 | - | - | |
| Cme04g00287 | 237 | Gene3D | - | 1 | 237 | IPR036457 | - | |
| Cme04g00287 | 237 | SUPERFAMILY | PP2C-like | 1 | 236 | IPR036457 | - | |
| Cme04g00287 | 237 | CDD | PP2Cc | 1 | 236 | IPR001932 | - | |
| Cme04g00287 | 237 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 236 | IPR001932 | - | |
| Cme04g00287 | 237 | Pfam | Protein phosphatase 2C | 1 | 229 | IPR001932 | - | |
| Cme04g00287 | 237 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 236 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g00287 | Cme-Chr4:2251536 | Cme07g01286 | Cme-Chr7:17917710 | 3.51E-107 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g00287 | K17506 | - | csv:101213414 | 470.314 |