Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00326 ATGGCACCGAGATTGGGGTTTTTGTGTCGGTGGGGTAAAGAGAAAGACCCTCAAAAGGGAACTCCGGTGGTTGTAACAATGGAGAAACCTAACTTCTCCGTCGTAGAGATCGACGGTCCCGACGCTGCATTCCGGCCGGTGGAGAAGAGTAGAGGCAAGAATGCCAAACAGGTTACATGGGTTCTTCTTCTAAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTCTTACTGTTCTTTGGGCATTGTTGGGAACAATCAAGAAGAGGCTGATCTACAGACAAGGAGTCGCCATTGAAGGCGGGAAGTTGGGAAGAGGGAAGTTATTGTTTGGAGTTATTAGAGTTTTCTTAGTAACTTCTATTGCCATTCTTGTTTTTGAAATACTTGCTTATTTCAAAGGCTGGCATTATTTTCAGAATTCCAATCTCCATATTCCTCAAGCTTCTGAGTTGCAAGGATTCCTTCATTCACTCTATGTAGCTTGGTTAACTTTTAGAGCAGACTACATTGCTCCCCTCATTCAAGCACTCTCTAAATTTTGCATTGTTTTGTTCCTTATTCAATCAGTGGATCGTATGATCCTTTGTTTCGGTTGCCTGTGGATTAAGTACAAAAGAATTGAACCCAAGATTGAAGGGGATCCCTTCAAGTTGGATGATGTGGAGGGAGCTGGGTACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGGGAGGTTTATGAGCAATCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGACCATTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGTTAATTAAAGCAGAGGTTGCTAAATGGAGCCAAAAGGGGGTAAATATAGTGTATCGCCATCGATTAGTAAGAACAGGATATAAAGCAGGGAATCTCAAGTCTGCAATGAGTTGCGATTATGTTAGAGATTATGAGTTTGTAGCAATTTTTGATGCTGACTTTCAACCTAATCCAGATTTTCTTAAACTGACCGTCCCCCATTTCAAGGATAACCCAGAGCTTGGGTTGGTTCAGGCCAGATGGTCTTTCGTGAACACGGACGAAAACTTGTTGACACGCCTTCAAAATATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGGGTGTTCCTTAATTTCTTCGGTTTTAATGGCACTGCTGGTGTTTGGAGGATTAAAGCCTTGGAGGAATCTGGAGGATGGCTTGAAAGAACCACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTCTTCAGATTGTGTCTTCCAGCAGTCATAAGTTCTAAGATATCAACATGGAAGAAGGCAAATTTGATACTATTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACTTTGTTCTGCATAATTCTTCCCCTAACCATGTTCGTACCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTATGTCCCCGTTTTCATGTCATTACTCAACATTCTTCCATCCCCAAAATCTTTTCCTTTTATTGTCCCCTACCTTCTTTTTGAGAACACCATGTCCGTCACCAAATTCAATGCCATGGTATCTGGTTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCTGGCAGGTCCTCCGAATCCGACTTACTAGCTGCTGCTGAAAGGGACTCTAAGACAATGAATCAAGCTCTGATCTATAGAGGTGCTTCCGAGAGTGAGATTTCCGAGTTGGCTCACTTGAAGGAACACAAAGAAGTAGTCTCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCTCTCGCGTTTCTTTTACTGTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTAACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 42.67 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLLTVLWALLGTIKKRLIYRQGVAIEGGKLGRGKLLFGVIRVFLVTSIAILVFEILAYFKGWHYFQNSNLHIPQASELQGFLHSLYVAWLTFRADYIAPLIQALSKFCIVLFLIQSVDRMILCFGCLWIKYKRIEPKIEGDPFKLDDVEGAGYKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQLLIKAEVAKWSQKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNTDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVISSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKTMNQALIYRGASESEISELAHLKEHKEVVSAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2611900 2615264 + MELO3C003616.2.1 Cme04g00326 324587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00326 695 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 449 IPR029044 -
Cme04g00326 695 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 531 IPR029044 -
Cme04g00326 695 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 695 - -
Cme04g00326 695 Pfam Glycosyl transferase family group 2 324 530 IPR001173 -
Cme04g00326 695 PANTHER - 13 695 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01858 Cme-Chr1:26514541 Cme04g00326 Cme-Chr4:2611900 0 dispersed
Cme03g02127 Cme-Chr3:28494790 Cme04g00326 Cme-Chr4:2611900 0 dispersed
Cme04g00326 Cme-Chr4:2611900 Cme09g00337 Cme-Chr9:2882557 0 dispersed
Cme04g00326 Cme-Chr4:2611900 Cme07g00257 Cme-Chr7:1672646 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00326 - - csv:101217415 1352.42