Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g00339 | GGTTGTGATGCTTCTGTGTTGATTCAAACAAATAACCATACTTCTGAGAAAGATAATGCAGAGAATCTTTCACTCGCTGGAGACGGTTTCGACACCGTGATCAAAGCTAAGGCTGCCGTTGATAGCGTCCCAGGATGTAAGAATAAGGTTTCTTGTGCTGACATTTTGGCTTTGGCTACTAGAGATGTTGTAGCTTTGACGGGAGGACCGTCATATGCCGTGGAGTTAGGAAGACGAGACGGGCGAATCTCGACAAGAAAGAGTGTTCGACATCATCTTCCTAAGCCTGATTTTGGATTAAATCAACTCAATGCTATGTTTGCTAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATCGGATTCTCACATTGCAAGCACTTCTCCAAAAGGCTATACAGTTTCCACAGCAAAAACAGAATAGACCCGACGTTTAATCCAACGTACGCCGACGAGCTCAAGAGGGAATGCCCAAGAAATGTCGACCAGAGAATTGCGGTCGACATGGACTCAATGTCGTCGTTCACATTCGACAACATGTACTTTAAGAATCTGCAGATGGGAAAAGGATTGTTCACGTCAGACCAAGTGCTGTTCACAGATCCAAGATCAAGAAAAACAGTCAACTTATTTGCTTCCAACAATACAGCTTTTGAGCAAGCTTTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAAAAACCAAGGAGAGATCAGAATCGATTGTGCATCAGTGAACTAA | 771 | 43.19 | GCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVALTGGPSYAVELGRRDGRISTRKSVRHHLPKPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPTYADELKRECPRNVDQRIAVDMDSMSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEQAFVVAMTKLGRVGVKTKNQGEIRIDCASVN | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2709196 | 2710726 | + | MELO3C003628.2.1 | Cme04g00339 | 324600 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g00339 | 256 | PRINTS | Haem peroxidase superfamily signature | 176 | 191 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Haem peroxidase superfamily signature | 50 | 67 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Haem peroxidase superfamily signature | 116 | 131 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Haem peroxidase superfamily signature | 68 | 80 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | Pfam | Peroxidase | 1 | 220 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | Gene3D | - | 1 | 256 | - | - | |
Cme04g00339 | 256 | PANTHER | - | 1 | 256 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | Gene3D | Peroxidase, domain 2 | 94 | 235 | - | - | |
Cme04g00339 | 256 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 256 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | SUPERFAMILY | Heme-dependent peroxidases | 1 | 256 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | CDD | secretory_peroxidase | 1 | 255 | IPR033905 | GO:0004601|GO:0042744 | |
Cme04g00339 | 256 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 116 | 126 | IPR019793 | - | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 49 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 115 | 127 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 230 | 243 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 68 | 83 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 190 | 207 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 174 | 189 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PRINTS | Plant peroxidase signature | 28 | 41 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme04g00339 | 256 | PANTHER | PEROXIDASE | 1 | 256 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g00339 | Cme-Chr4:2709196 | Cme11g00354 | Cme-Chr11:3632127 | 6.32E-125 | dispersed | |
Cme04g00339 | Cme-Chr4:2709196 | Cme09g00334 | Cme-Chr9:2836544 | 8.69E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g00339 | K00430 | - | csv:101218982 | 510.375 |