Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00339 GGTTGTGATGCTTCTGTGTTGATTCAAACAAATAACCATACTTCTGAGAAAGATAATGCAGAGAATCTTTCACTCGCTGGAGACGGTTTCGACACCGTGATCAAAGCTAAGGCTGCCGTTGATAGCGTCCCAGGATGTAAGAATAAGGTTTCTTGTGCTGACATTTTGGCTTTGGCTACTAGAGATGTTGTAGCTTTGACGGGAGGACCGTCATATGCCGTGGAGTTAGGAAGACGAGACGGGCGAATCTCGACAAGAAAGAGTGTTCGACATCATCTTCCTAAGCCTGATTTTGGATTAAATCAACTCAATGCTATGTTTGCTAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATCGGATTCTCACATTGCAAGCACTTCTCCAAAAGGCTATACAGTTTCCACAGCAAAAACAGAATAGACCCGACGTTTAATCCAACGTACGCCGACGAGCTCAAGAGGGAATGCCCAAGAAATGTCGACCAGAGAATTGCGGTCGACATGGACTCAATGTCGTCGTTCACATTCGACAACATGTACTTTAAGAATCTGCAGATGGGAAAAGGATTGTTCACGTCAGACCAAGTGCTGTTCACAGATCCAAGATCAAGAAAAACAGTCAACTTATTTGCTTCCAACAATACAGCTTTTGAGCAAGCTTTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAAAAACCAAGGAGAGATCAGAATCGATTGTGCATCAGTGAACTAA 771 43.19 GCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVALTGGPSYAVELGRRDGRISTRKSVRHHLPKPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPTYADELKRECPRNVDQRIAVDMDSMSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEQAFVVAMTKLGRVGVKTKNQGEIRIDCASVN 256
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 2709196 2710726 + MELO3C003628.2.1 Cme04g00339 324600
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00339 256 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 Pfam Peroxidase 1 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 Gene3D - 1 256 - -
Cme04g00339 256 PANTHER - 1 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 Gene3D Peroxidase, domain 2 94 235 - -
Cme04g00339 256 ProSiteProfiles Plant heme peroxidase family profile. 1 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 SUPERFAMILY Heme-dependent peroxidases 1 256 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 CDD secretory_peroxidase 1 255 IPR033905 GO:0004601|GO:0042744
Cme04g00339 256 ProSitePatterns Peroxidases proximal heme-ligand signature. 116 126 IPR019793 -
Cme04g00339 256 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 115 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 230 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 190 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 174 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PRINTS Plant peroxidase signature 28 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g00339 256 PANTHER PEROXIDASE 1 256 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00339 Cme-Chr4:2709196 Cme11g00354 Cme-Chr11:3632127 6.32E-125 dispersed
Cme04g00339 Cme-Chr4:2709196 Cme09g00334 Cme-Chr9:2836544 8.69E-73 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00339 K00430 - csv:101218982 510.375