Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00347 ATGCCGGGTCTAACCTGTAACGCCTGTAACAAAGAATTTCTAGACGTCGATGAGCAAAAGCTTCACTACAAATCCGAGTGGCATCGATATAACCTTAAGCGCAAGGTTGCTAATGTTCCTGGAGTAACAGAGGCATTGTTTTTAGCTAGACAATCTGCTGCAGCTGCACAAGAGAATGCCAAATCAAGAGAGACCGCAATGTTATACTCTTGTTGTCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCACATGCCCAACACCTTAAGTCTAGGAGTCATATCATTCGAGCTTCGCAAGGAGCACATGATCAAGAAGTCGAAAAGCCAATAATTAAGCCCCTTCCCCAGCGAATTTCCAACAAGGCACCCCAACAAAGTGAGGAGGAAGAGAGTGAGGATGAGTGGGAAGAAGTTGATCCTGATGAAGACATGGTTGATGGAAATGAGGATGAGGATGAAGATATCGATGCCATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATCTAGAGCATGATACCATTGAGAGTTGCATGGTCCACATGCACAAGAAACATGGATTCTTTATTCCTGACATTGAATATTTGAAGGATCCAAAAGGCTTCCTTACATATGTCGGCCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAATGATAATTGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCAAAAAGCCATTGCAAAGTGCATTATGGTGATGAAGACGAGAATGAAGAAGTAGAATTGGAGGAATTTTACGATTACAGCAGCAGTTATGTGGATGGAGGTGGCAACCAGCTCGTACCATCAGGTGCTCGAGACAATACTGTCGAATTTGGTAGTGGTGGAGCAGAGCTCATCTTAGTTCAAGGAAGCGGCGAACGGCAATCGACTAAAACACTTGGTTCCAGACAATTTCTACGTTATTATCGCCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATTACTGCTGTATTGGCAGCAAGGTACAGGAGTATGGGATTGGCAACGGTCCAATCAAGAGAAAAGATGATCAGGATGAAGGTGATGAAAGAAATGAATCGAACCGGGTTGGAAGCAATGCGCACCAAAATCGGATTGAAGAACAACGTAATCCGAAACTTGCCTAAGAATGTTCCACATTAG 1182 44.25 MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSRETAMLYSCCLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISNKAPQQSEEEESEDEWEEVDPDEDMVDGNEDEDEDIDAIEVDLDPSCCFMCDLEHDTIESCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGARDNTVEFGSGGAELILVQGSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2755862 2758892 + MELO3C003636.2.1 Cme04g00347 324608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00347 393 ProSitePatterns Zinc finger C2H2 type domain signature. 71 93 IPR013087 -
Cme04g00347 393 PANTHER ZINC FINGER PROTEIN-RELATED 1 392 - -
Cme04g00347 393 PANTHER ZINC FINGER PROTEIN 622 1 392 IPR040025 -
Cme04g00347 393 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Cme04g00347 393 MobiDBLite consensus disorder prediction 112 149 - -
Cme04g00347 393 MobiDBLite consensus disorder prediction 127 149 - -
Cme04g00347 393 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Cme04g00347 393 Pfam C2H2 type zinc-finger (2 copies) 167 268 IPR041661 -
Cme04g00347 393 SUPERFAMILY beta-beta-alpha zinc fingers 150 203 IPR036236 -
Cme04g00347 393 SMART c2h2final6 165 188 IPR013087 -
Cme04g00347 393 SMART c2h2final6 216 243 IPR013087 -
Cme04g00347 393 SMART c2h2final6 69 93 IPR013087 -
Cme04g00347 393 SMART c2h2final6 4 28 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00347 K14816 - csv:101219700 723.776