Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00435 ATGGCTATGGACGATACCGAAAGCTGTAGTAGTAGAGCGGTGGATGACTTCTCAGCTCAGACTTGGAGACAGAAGCAGAAGGTTGGAGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCGCACGAAGCGGAGACCAGCCTTCCTGGTTTTGAGGATGAACTCTGGGCTCATTTTCATCGACTTCCTACTAGGTATGCTATGGACGTCAATGTTGAGAGGGCTCAAGACGTTCTCATGCACAAAAATCTTCTCTACATGGCACGTGATCCTGATACTCGACCTGCAATTGACGTTCGTCTTGTACAGGTTCATTCATCTCCTGGCAGGAACTTTGGCAAGTCAGTTAATTGGAGCTTGAAGGAAAAAGTGGACCAGGAGCGGTTTTCTGGTTATGACAGCAATCAGAGACACCACCCCCCACCAGCATTTGGTTCATCAACACGGGTCGAATATGGTTTTGAGACCAGCCAATTACATGATATAGACCAACGGGGGACTTTCTCCTGGCCAATGCATGAAATTACAATATCAACAATTGACAAGCCAAAATTGCTCAGTCAGTTGACGTCCTTACTTTCTGAGATTGGGCTGAATATTCAAGAAGCACATGCTTTTTCAACAACAGATGGCTTTTCTTTGGATGTTTTTGTAGTTGATGGTTGGATAATTGAGAGGATACCAAGCAGCTAA 693 45.45 MAMDDTESCSSRAVDDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWAHFHRLPTRYAMDVNVERAQDVLMHKNLLYMARDPDTRPAIDVRLVQVHSSPGRNFGKSVNWSLKEKVDQERFSGYDSNQRHHPPPAFGSSTRVEYGFETSQLHDIDQRGTFSWPMHEITISTIDKPKLLSQLTSLLSEIGLNIQEAHAFSTTDGFSLDVFVVDGWIIERIPSS 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3440002 3447778 - MELO3C003722.2.1 Cme04g00435 324696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00435 230 SUPERFAMILY ACT-like 172 221 IPR045865 -
Cme04g00435 230 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 225 - -
Cme04g00435 230 ProSiteProfiles ACT domain profile. 174 230 IPR002912 -
Cme04g00435 230 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE 12 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00435 Cme-Chr4:3440002 Cme06g02352 Cme-Chr6:30841256 4.87E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00435 - - cpep:111789352 387.111