Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00447 ATGTATCCTGTGGTTCCCGGGCATGAGATGACAGGGGTGATCACGAAAGTAGGAAACAACGTGAAGAAGTTCAAAATAGGAGACAAAGTGGGTGTTGGATGTATAGCCGCTACATGTTTGAACTGTGAATTCTGCCAAGATTCCCAAGAGAATTACTGTGAAAATTTACAGTTCACGTACAACGGAATCTTCTGGGATGGCAGCATAACATACGGGGGATACTCCAAAATGTTTGTTTCAGATCAAAGGTACGTTGTGCACATACCGGAGAGCCTACCAATGGACGCAGCGGCGCCGTTGCTATGTGCGGGAATAACCGTGTTTACCCCGATGAAAGACCTCGGTCTGATTGATTCGCCGGGGAAGAAAGTGGGAGTGGTGGGGCTCGGAGGGCTAGGCCATTTAGCAGTAAAATTTGCAAAGGCGTTTGGGCACCATGTGACAGTGATCAGTACCTCTGCTTCAAAGGAACAAGAAGCCAAAAAAAGACTTGGGGCTGACGAGTTCATAGTCAGTAAAGATTCTGAACAAATGCAGAATTACAAGAGGACGCTTGATTTTATATTGGACACAGTGTCAGCACAGCATTGCATTGGACCAATCTTGGAGCTGCTAAAAGTGAATGGGACATTGTCAATTGTGGGAGCTCCAGACAAGCCCATTCAATTGCCTTCTTTTCCTTTAATATTTGGGAAGAGGACAGTGAAGGGAAGCATAATCGGTGGAATACAAGAGACACAAGAGATGATGAATCTGTGTGGGAAGTACAACATTACAAGTGATATTGAAGTGATTAAGCCACAACACATCAACCATGCAATGGAACGCCTTATCCAAAACGATGTTCGATACCGATTTGTCATTGACATTGCCCAGAACAAAACCGATTGTTAA 894 44.63 MYPVVPGHEMTGVITKVGNNVKKFKIGDKVGVGCIAATCLNCEFCQDSQENYCENLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDLGLIDSPGKKVGVVGLGGLGHLAVKFAKAFGHHVTVISTSASKEQEAKKRLGADEFIVSKDSEQMQNYKRTLDFILDTVSAQHCIGPILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMNLCGKYNITSDIEVIKPQHINHAMERLIQNDVRYRFVIDIAQNKTDC 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3546623 3549664 - MELO3C003735.2.1 Cme04g00447 324708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00447 297 Gene3D - 2 290 - -
Cme04g00447 297 SUPERFAMILY GroES-like 2 117 IPR011032 -
Cme04g00447 297 Pfam Zinc-binding dehydrogenase 131 252 IPR013149 -
Cme04g00447 297 CDD CAD1 1 289 - -
Cme04g00447 297 Gene3D - 103 260 - -
Cme04g00447 297 Pfam Alcohol dehydrogenase GroES-like domain 2 87 IPR013154 -
Cme04g00447 297 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 7 21 IPR002328 GO:0008270|GO:0016491
Cme04g00447 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 258 IPR036291 -
Cme04g00447 297 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 293 - -
Cme04g00447 297 PANTHER ALDEHYDE REDUCTASE 1 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00447 Cme-Chr4:3546623 Cme08g00714 Cme-Chr8:4754121 3.19E-118 dispersed
Cme04g00447 Cme-Chr4:3546623 Cme06g01378 Cme-Chr6:12016238 1.79E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00447 K00083 - csv:101213170 559.296