Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00451 ATGCAAAGCATTTCTTTTTGTGTTTTTTTAGCTTTGGTTTGTGTCACCTTTTGTCTTGTTTCTGAAAATGTTGAAGTAGCTGATGCTGCAGAAGATGCAAAAAATGGTGTTTATATCGTTTACATGGGATCCGCTTCTGGCTCCAGGATTGACTTCCTTCGCCTTCTTAACTCTGTCAACAGACGGAACGCACTGGTGCACACATATAAACATGGGTTCACAGGATTTGCAGCTCGTCTATCAGAACATGAAGCCCAAGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCTGATCCAATATTGAAGTTACACACAACTCATTCATGGGATTTCTTGGTCAGTCAGACAAGCGTCAAAGTCGACGCCAATCCCAAATCAGATTCCCCAACCTCTTCCTCTCAACCGTACGATACCATTATAGGAATCTTGGATACTGGTATCTGGCCGGAATCGGAGAGTTTTAATGACAAGGGTATGGGTCCAATACCTTCGAGGTGGAAAGGTACCTGCATGATAGGCGATGACTTCACTTCCTCCAACTGTAATAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGTGACGGCATACGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTGGCATCAACGGCGGCCGGAAGCGCCGTGGCTAATGCATCCTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCCGCTCAAGGATCGCCATGTACAGAGTCTGCATGGCCGACGGCTGTCGTGGGTCGTCGATCCTGAAGGCGTTTGATGATTCCATCGCCGATGGGGTCGATGTATTGTCCTTATCTCTCGGTTCACCCTCCTTCTTGCGACCAGATCTGACGGCAGACCCTATTGCCATCGGAGCCTTTCATGCGGTTGAGAAGGGCATTACAGTTGTCTGCTCCGCCGGAAACGACGGTCCCAGTTCGGGAACGGTGGTGAACGACGCGCCAACAGTTACAAATGTTGGTGGCAATGGTGAAACAGTTTACACAGTCAGTGTAGACGCACCTGAGGAAGTAGAGGTCAAAGTGATTCCAGAGAAATTGAAATTTGCAAAGAACAATGAGAAGCAGAGTTATCAAGTGGTTTTCACCCCAACTGCATCCACACTGAAAGAAAGAGTCTTTGGTTCAATCACTTGGACCAATGGAAAACATCGAGTCCGAAGTCCATTTGTCGTCACTAGTGAGAGTAGTGAGCCATAA 1245 48.43 MQSISFCVFLALVCVTFCLVSENVEVADAAEDAKNGVYIVYMGSASGSRIDFLRLLNSVNRRNALVHTYKHGFTGFAARLSEHEAQAMRQSPGVVSVFPDPILKLHTTHSWDFLVSQTSVKVDANPKSDSPTSSSQPYDTIIGILDTGIWPESESFNDKGMGPIPSRWKGTCMIGDDFTSSNCNRKIIGARFYESSESDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPRSRIAMYRVCMADGCRGSSILKAFDDSIADGVDVLSLSLGSPSFLRPDLTADPIAIGAFHAVEKGITVVCSAGNDGPSSGTVVNDAPTVTNVGGNGETVYTVSVDAPEEVEVKVIPEKLKFAKNNEKQSYQVVFTPTASTLKERVFGSITWTNGKHRVRSPFVVTSESSEP 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3581832 3586890 + MELO3C003737.2.1 Cme04g00451 324712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00451 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 336 IPR045051 -
Cme04g00451 414 Pfam Fibronectin type-III domain 329 407 IPR041469 -
Cme04g00451 414 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 331 409 - -
Cme04g00451 414 Gene3D Peptidase S8/S53 domain 139 338 IPR036852 GO:0004252|GO:0006508
Cme04g00451 414 Pfam Peptidase inhibitor I9 37 106 IPR010259 -
Cme04g00451 414 ProSiteProfiles Serine proteases, subtilase domain profile. 110 414 - -
Cme04g00451 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 331 409 IPR045051 -
Cme04g00451 414 CDD Peptidases_S8_3 103 336 IPR034197 -
Cme04g00451 414 SUPERFAMILY Subtilisin-like 136 339 IPR036852 GO:0004252|GO:0006508
Cme04g00451 414 Pfam Subtilase family 140 330 IPR000209 GO:0006508|GO:0008236
Cme04g00451 414 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 106 IPR037045 -
Cme04g00451 414 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Cme04g00451 414 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 44 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01368 Cme-Chr2:19777722 Cme04g00451 Cme-Chr4:3581832 3.59E-08 dispersed
Cme04g00451 Cme-Chr4:3581832 Cme03g01479 Cme-Chr3:24014795 2.78E-97 dispersed
Cme04g00451 Cme-Chr4:3581832 Cme04g02414 Cme-Chr4:30779716 2.83E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00451 K25898 - csv:101213415 611.298