Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cme04g00486	ATGTGCCAAGTTCAAAATGTTACCTTACATGCTGACAAAGATTCAGATGAAATCTATGCTCAAATGAGTCTTCAACCGGTGAACTCTGAAAAAGATGTTTTCCTAGTTCCTGACTTTGGATTAAGGCCAAGTAAACACCCAAATGAGTTCTTCTGCAAAACTTTAACTGCCAGTGACACCAGCACGCACGGTGGGTTCTCAGTGCCACGCAGAGCTGCTGAAAAACTCTTTCCTCCATTGGATTACACAATGCAACCGCCAACTCAGGAGCTCATCGTTAGAGACTTGCATGACAATACCTGGACTTTTCGCCACATATACCGCGGGCAGCCGAAACGACACCTTCTCACAACTGGGTGGAGTCTATTCGTTGGAGCAAAGAGGCTTAGAGCAGGAGATTCTGTCCTTTTTATAAGGGATGAAAAGTCTCAGTTGCTTATTGGAGTGAGGCGTGCTAACCGGCAACAAACAACATTGCCATCATCGGTTCTATCTGCGGATAGTATGCATATTGGAGTTCTTGCTGCTGCGGCTCATGCTGCTGCTAATCGAAGTCCATTCACAATCTTCTACAACCCCAGGGCATGTCCTTCAGAATTTGTTATTCCTTTAGCCAAGTATCGCAAATGTGTATACGGAACTCAGCTTTCTGCAGGCATGAGGTTCGGGATGATGTTTGAAACAGAAGAGTCTGGTAAACGTCGATATATGGGAACAATTGTTGGAATTAGCGATTTAGATCCACTTAGATGGCCAGGTTCCAAGTGGCGAAATCTTCAGGTAGAGTGGGATGAGCCAGGATGCTGCGATAAGCAGAACAGGGTTAGTTCATGGGAAATAGAAACTCCAGAAAGTCTATTCATTTTTCCTTCTCTGACTTCGGGTCTTAAACGTCCATTACACGGTGGATTCTTGGGAGAAACTGATTGGGGAAGTCTGGTGAAGAGACCAATGCTTCGTGTTCCAGAAAATATACGTGGGGATCTTTCATATGCCCCAACTTTATGCTCCGAACCACTGATGAAGATGCTACTGAGGCCTCAATTGGTTAACCTTAATGGAACCACCTTACAACAAGATTCAGCTAACAATTTAGTTAAGATACAGGACATGAAGGACATGCAGAATCCCAAAATGCAGCAGCTTATACCGACGGAAACTGCCTCTCCCGGGAATCAAAATCAGCATCATCCAGGACCTGCACAATCTGACCCTATCAGCCCAAATTCATCACCAAAAGCAAATGTACCCGGAAAAATGCACACCTCGGTGGCCATTGGAAGTGAAGCTCCAACTGCAGCTGATGGAGACAAGGCAAAATATGATCGTGACTTGTCAGCCTCAACCCATCAATCCAATCCCTTGCCCCCCGTTGGAGGTTGTGCAGAGGAAAAACTCACCGGTAATGAAGTGAATATGCAAACACTTGTAAACCAGCTTTCGTTTGTGAACCAGAATCAGATTCCCATGGAGTTGCAATCCGTATCATGGCCGATGCAGCCTCAGCTTGAATCACTAATCCAACATCCACAACCAATCGACATGCCTCAGCCTGAATATACGAATTCAAATGGTTTGATTTCATCCTTGGATGGCGATGGATGTTTGATTAACCCATCCTGTCTACCTCTTCCTGGAGTAATGAGATCACCAGGAAATCTTTCCATGTTGGGATTGCAAGACTCCTCAACAGTCTTCCCTGAGGTTCTTAATTTTCCCTTACCTTCAACAGGCCAAGACATGTGGGATCCTCTTAATAATATGAGGTTCTCATCTCAAACCAATCATCTCGTCTCATTCTCTCATGCAGACGCATCTAACCTCAACTGTATGGCCAATGCAAATATTACGAGAGATGTTTCAGATGAAAGCAACAACCAAAGTGGGATATATAGTTGTTCTAACCTTGAAATGAGTAATGGTGGAAGTACTTTGGTTGATCATGCAGTTTCAAGTACCATTCTTGAGGATTATTGTACACTGAAAGATGCTGACTTCCCACATCCTTCAGATTGCTTGGCTGGAAACTTCAGTTCGAGTCAAGATGTTCAATCTCAGATTACCTCTGCTAGTTTGGGAGATTCTCAGGCTTTCTCCAGGCAAGAATTCCATGATAATTCAGCTGGTACATCCTCATGCAATGTGGACTTTGATGAGGGCAGTCTTCTACAAAATGGTTCATGGAAGCAAGTGGTACCGCCCTTGAGAACTTACACGAAGGTCCAGAAGGCAGGATCCGTTGGGAGATCTATTGATGTCACAAGTTTTAAGAACTACGACGAACTGTGCTCTGCTATCGAATGTATGTTTGGACTTGAAGGGTTGCTTAACGACCCAAGAGGCTCGGGATGGAAGCTGGTTTATGTGGATTATGAGAAGGACGTCCTGCTTATCGGTGATGATCCCTGGGAGGAATTTGTAAGTTGTGTACGCTGCATCAGAATCTTGTCACCTTCAGAAGTTCAGCAAATGAGCGAAGAGGGAATGAAACTTCTCAACAGTGCTATGATGCAAGGCATCAATTGCCCCATGTCGGAAGGTGGGCGAGCTTGA	2553	44.73	MCQVQNVTLHADKDSDEIYAQMSLQPVNSEKDVFLVPDFGLRPSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSLTSGLKRPLHGGFLGETDWGSLVKRPMLRVPENIRGDLSYAPTLCSEPLMKMLLRPQLVNLNGTTLQQDSANNLVKIQDMKDMQNPKMQQLIPTETASPGNQNQHHPGPAQSDPISPNSSPKANVPGKMHTSVAIGSEAPTAADGDKAKYDRDLSASTHQSNPLPPVGGCAEEKLTGNEVNMQTLVNQLSFVNQNQIPMELQSVSWPMQPQLESLIQHPQPIDMPQPEYTNSNGLISSLDGDGCLINPSCLPLPGVMRSPGNLSMLGLQDSSTVFPEVLNFPLPSTGQDMWDPLNNMRFSSQTNHLVSFSHADASNLNCMANANITRDVSDESNNQSGIYSCSNLEMSNGGSTLVDHAVSSTILEDYCTLKDADFPHPSDCLAGNFSSSQDVQSQITSASLGDSQAFSRQEFHDNSAGTSSCNVDFDEGSLLQNGSWKQVVPPLRTYTKVQKAGSVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEKDVLLIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGINCPMSEGGRA	850

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
4	3889065	3894392	+	MELO3C003768.2.1	Cme04g00486	324747

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cme04g00486	850	MobiDBLite	consensus disorder prediction	384	463	-	-
Cme04g00486	850	Pfam	Auxin response factor	177	260	IPR010525	GO:0003677\|GO:0005634\|GO:0006355\|GO:0009725
Cme04g00486	850	Gene3D	-	49	152	IPR015300	-
Cme04g00486	850	PANTHER	AUXIN RESPONSE FACTOR 4-RELATED	1	840	IPR044835	GO:0003677\|GO:0006355\|GO:0009725
Cme04g00486	850	SMART	B3_2	51	153	IPR003340	GO:0003677
Cme04g00486	850	ProSiteProfiles	PB1 domain profile.	736	820	IPR000270	GO:0005515
Cme04g00486	850	Gene3D	-	733	825	-	-
Cme04g00486	850	CDD	B3_DNA	50	151	IPR003340	GO:0003677
Cme04g00486	850	SUPERFAMILY	CAD & PB1 domains	738	815	-	-
Cme04g00486	850	MobiDBLite	consensus disorder prediction	384	417	-	-
Cme04g00486	850	ProSiteProfiles	B3 DNA-binding domain profile.	51	153	IPR003340	GO:0003677
Cme04g00486	850	Pfam	B3 DNA binding domain	51	152	IPR003340	GO:0003677
Cme04g00486	850	Pfam	AUX/IAA family	780	823	IPR033389	-
Cme04g00486	850	SUPERFAMILY	DNA-binding pseudobarrel domain	38	180	IPR015300	-
Cme04g00486	850	Gene3D	-	215	287	-	-
Cme04g00486	850	PANTHER	AUXIN RESPONSE FACTOR 5	1	840	-	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cme04g00486	K14486	K14486, ARF; auxin response factor	-	csv:101216825	1706.03

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cme04g00486	Cme-Chr4:3889065	Cme05g02083	Cme-Chr5:29030924	1.49E-37	dispersed
Cme08g01661	Cme-Chr8:18129226	Cme04g00486	Cme-Chr4:3889065	5.18E-18	dispersed
Cme04g00486	Cme-Chr4:3889065	Cme08g00111	Cme-Chr8:821892	3.52E-136	transposed

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi18g1078	.	Blo12g00892	.	Bda03g00281	.	Bpe04g00237	Bma04g00238	Bma01g02358	.	.	Cma01g01959	Cma09g00118	Car01g01531	.	.	Cpe06g00079	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cone7ag1874	.	.	Lsi04g01726	Csa03g04263	Chy04g00433	.	.	.	.	.	.	.	.	.	.	Cmo01g02017	Cmo09g00115	.	.	.	Car09g00105	.	Cpe02g00083	Bhi09g02107	.	.	.	Hepe01g1631	Mch11g0134	.	Cla05g01890	Cam05g2024	Cec05g2034	Cco05g2092	Clacu05g2015	Cmu05g1895	Cre05g2020	.	.	.	Cme04g00486

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cme03g00482	.	74	276	B3 DNA Binding Superfamily	AT3G26790	55.2	2.2e-63	239.6
Cme08g00291	.	105	274	B3 DNA Binding Superfamily	AT1G28300	51.8	8.3e-38	154.8
Cme10g00289	.	16	344	B3 DNA Binding Superfamily	AT1G25560	62.8	3.4e-108	388.7
Cme09g00779	.	34	307	B3 DNA Binding Superfamily	AT1G25560	62.3	5.4e-90	328.2
Cme04g02367	.	41	159	B3 DNA Binding Superfamily	AT1G25560	65.5	9.7e-39	157.9
Cme09g01901	.	53	161	B3 DNA Binding Superfamily	AT1G25560	66.1	5.3e-37	152.1
Cme11g02307	.	96	211	B3 DNA Binding Superfamily	AT1G25560	62.1	7.0e-37	151.8
Cme09g01901	.	52	166	B3 DNA Binding Superfamily	AT1G01030	84.5	1.3e-53	207.2
Cme07g01632	.	62	171	B3 DNA Binding Superfamily	AT1G01030	79.5	2.1e-48	189.9
Cme10g00289	.	179	287	B3 DNA Binding Superfamily	AT1G01030	67.0	1.0e-37	154.5
Cme08g02302	.	14	696	B3 DNA Binding Superfamily	AT4G30080	58.5	4.1e-216	748.0
Cme11g01803	.	4	688	B3 DNA Binding Superfamily	AT4G30080	57.3	3.0e-211	731.9
Cme03g01275	.	8	689	B3 DNA Binding Superfamily	AT4G30080	54.8	1.0e-198	690.3
Cme11g00493	.	16	380	B3 DNA Binding Superfamily	AT3G18990	57.8	2.0e-103	372.9
Cme10g01685	.	5	673	B3 DNA Binding Superfamily	AT1G59750	68.5	3.4e-247	851.3
Cme07g01536	.	19	667	B3 DNA Binding Superfamily	AT1G59750	50.2	8.5e-158	554.3
Cme01g00630	.	1	341	B3 DNA Binding Superfamily	AT1G59750	63.3	3.5e-119	426.0
Cme08g00111	CCT	23	383	B3 DNA Binding Superfamily	AT1G59750	55.6	1.1e-107	387.9
Cme12g01152	CCT	23	396	B3 DNA Binding Superfamily	AT1G59750	53.4	2.2e-105	380.2
Cme05g01243	.	20	412	B3 DNA Binding Superfamily	AT1G59750	50.3	4.1e-104	375.9
Cme05g02083	CCT	23	358	B3 DNA Binding Superfamily	AT1G59750	54.4	1.0e-102	371.3
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT1G59750	51.4	6.0e-79	292.4
Cme11g01803	.	3	688	B3 DNA Binding Superfamily	AT2G28350	58.2	1.5e-210	729.6
Cme08g02302	.	13	696	B3 DNA Binding Superfamily	AT2G28350	54.9	3.2e-197	685.3
Cme03g01275	.	13	686	B3 DNA Binding Superfamily	AT2G28350	50.6	1.0e-171	600.5
Cme07g01536	.	19	670	B3 DNA Binding Superfamily	AT2G46530	54.4	3.1e-178	622.1
Cme09g01853	.	18	671	B3 DNA Binding Superfamily	AT2G46530	52.7	1.9e-175	612.8
Cme10g01685	.	13	663	B3 DNA Binding Superfamily	AT2G46530	51.4	6.8e-165	577.8
Cme01g00630	.	1	326	B3 DNA Binding Superfamily	AT2G46530	73.7	1.2e-132	470.7
Cme08g00111	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	51.6	7.1e-98	355.1
Cme12g01152	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	50.1	7.4e-95	345.1
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT2G46530	50.5	1.1e-74	278.1
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34310	51.4	2.1e-91	333.6
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G35540	51.7	2.1e-94	343.6
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G35520	51.8	2.8e-91	333.2
Cme08g02302	.	14	696	B3 DNA Binding Superfamily	AT4G30080	58.5	4.1e-216	748.0
Cme11g01803	.	4	688	B3 DNA Binding Superfamily	AT4G30080	57.3	3.0e-211	731.9
Cme03g01275	.	8	689	B3 DNA Binding Superfamily	AT4G30080	54.8	1.0e-198	690.3
Cme07g01536	.	55	670	B3 DNA Binding Superfamily	AT3G61830	51.4	2.2e-159	559.3
Cme09g01853	.	54	678	B3 DNA Binding Superfamily	AT3G61830	51.3	2.3e-156	549.3
Cme10g01685	.	53	644	B3 DNA Binding Superfamily	AT3G61830	51.2	5.3e-153	538.1
Cme01g00630	.	1	324	B3 DNA Binding Superfamily	AT3G61830	72.1	2.2e-135	479.6
Cme08g00111	CCT	51	364	B3 DNA Binding Superfamily	AT3G61830	53.2	7.2e-86	315.1
Cme12g01152	CCT	51	364	B3 DNA Binding Superfamily	AT3G61830	51.4	4.4e-83	305.8
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT3G61830	51.1	2.0e-75	280.4
Cme05g02083	CCT	1	1110	B3 DNA Binding Superfamily	AT1G19220	62.5	0.0e+00	1177.2
Cme08g00111	CCT	1	468	B3 DNA Binding Superfamily	AT1G19220	59.2	2.1e-153	540.4
Cme02g02113	.	41	396	B3 DNA Binding Superfamily	AT1G19220	52.8	6.2e-105	379.4
Cme10g01685	.	26	387	B3 DNA Binding Superfamily	AT1G19220	50.7	2.8e-97	354.0
Cme08g00264	.	46	379	B3 DNA Binding Superfamily	AT1G19220	50.1	1.5e-90	331.6
Cme01g00630	.	2	310	B3 DNA Binding Superfamily	AT1G35240	53.5	5.6e-92	335.5
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34410	52.0	6.1e-94	342.0
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34390	53.7	5.4e-95	345.5
Cme07g01536	.	25	229	B3 DNA Binding Superfamily	AT1G43950	55.8	6.8e-59	224.2
Cme09g01853	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.8	5.8e-58	221.1
Cme10g01685	.	19	227	B3 DNA Binding Superfamily	AT1G43950	51.2	3.7e-57	218.4
Cme02g02113	.	41	246	B3 DNA Binding Superfamily	AT1G43950	52.9	6.4e-57	217.6
Cme01g00630	.	2	160	B3 DNA Binding Superfamily	AT1G43950	54.7	1.4e-40	163.3
Cme08g00264	.	149	434	B3 DNA Binding Superfamily	AT2G33860	66.2	1.1e-108	390.6
Cme11g01785	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.7	1.4e-90	330.5
Cme02g02113	.	147	436	B3 DNA Binding Superfamily	AT2G33860	51.0	1.1e-76	284.3
Cme08g00111	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	7.0e-71	265.0
Cme12g01152	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	1.2e-70	264.2
Cme05g02083	CCT	126	356	B3 DNA Binding Superfamily	AT2G33860	54.5	5.0e-69	258.8
Cme07g01536	.	130	357	B3 DNA Binding Superfamily	AT2G33860	52.4	1.9e-68	256.9
Cme04g00486	.	51	309	B3 DNA Binding Superfamily	AT2G33860	53.5	4.3e-68	255.8
Cme05g01243	.	145	376	B3 DNA Binding Superfamily	AT2G33860	54.3	9.5e-68	254.6
Cme01g00630	.	61	288	B3 DNA Binding Superfamily	AT2G33860	52.4	2.0e-65	246.9
Cme09g01853	.	129	356	B3 DNA Binding Superfamily	AT2G33860	51.1	1.7e-64	243.8
Cme11g01785	.	48	802	B3 DNA Binding Superfamily	AT5G60450	60.3	2.2e-250	862.1
Cme08g00111	CCT	7	377	B3 DNA Binding Superfamily	AT5G60450	50.9	6.9e-103	372.1
Cme12g01152	CCT	7	377	B3 DNA Binding Superfamily	AT5G60450	50.7	9.0e-103	371.7
Cme05g02083	CCT	14	374	B3 DNA Binding Superfamily	AT5G60450	50.1	1.4e-98	357.8
Cme04g00486	.	1	286	B3 DNA Binding Superfamily	AT5G60450	51.5	1.2e-78	291.6
Cme04g00486	.	1	841	B3 DNA Binding Superfamily	AT1G19850	60.1	3.5e-255	878.2
Cme08g00111	CCT	19	367	B3 DNA Binding Superfamily	AT1G19850	65.6	2.9e-137	486.5
Cme10g01685	.	16	357	B3 DNA Binding Superfamily	AT1G19850	52.2	3.5e-98	356.7
Cme12g01152	CCT	1	898	B3 DNA Binding Superfamily	AT1G30330	70.5	0.0e+00	1171.4
Cme08g00111	CCT	1	718	B3 DNA Binding Superfamily	AT1G30330	71.3	4.3e-272	934.5
Cme10g01685	.	23	383	B3 DNA Binding Superfamily	AT1G30330	54.0	5.0e-103	372.9
Cme07g01536	.	25	379	B3 DNA Binding Superfamily	AT1G30330	52.1	1.6e-101	367.9
Cme09g01853	.	24	397	B3 DNA Binding Superfamily	AT1G30330	50.1	1.1e-97	355.1
Cme01g00630	.	1	288	B3 DNA Binding Superfamily	AT1G30330	53.5	2.8e-82	303.9
Cme05g02083	CCT	1	1094	B3 DNA Binding Superfamily	AT5G20730	58.1	0.0e+00	1076.6
Cme08g00111	CCT	4	468	B3 DNA Binding Superfamily	AT5G20730	59.5	4.6e-151	532.7
Cme12g01152	CCT	4	469	B3 DNA Binding Superfamily	AT5G20730	59.1	4.6e-151	532.7
Cme02g02113	.	41	393	B3 DNA Binding Superfamily	AT5G20730	52.8	9.4e-104	375.6
Cme10g01685	.	6	360	B3 DNA Binding Superfamily	AT5G20730	51.0	4.7e-95	346.7
Cme12g01152	CCT	97	861	B3 DNA Binding Superfamily	AT5G37020	53.2	4.2e-187	651.7
Cme08g00111	CCT	97	464	B3 DNA Binding Superfamily	AT5G37020	77.3	4.0e-161	565.5
Cme05g02083	CCT	96	362	B3 DNA Binding Superfamily	AT5G37020	71.1	1.0e-108	391.3
Cme05g01243	.	115	472	B3 DNA Binding Superfamily	AT5G37020	58.6	1.9e-107	387.1
Cme01g00630	.	54	288	B3 DNA Binding Superfamily	AT5G37020	55.2	1.7e-71	267.7
Cme09g01853	.	20	672	B3 DNA Binding Superfamily	AT4G23980	57.7	6.2e-198	687.6
Cme07g01536	.	1	667	B3 DNA Binding Superfamily	AT4G23980	56.4	3.2e-194	675.2
Cme10g01685	.	16	644	B3 DNA Binding Superfamily	AT4G23980	52.8	1.0e-168	590.5
Cme01g00630	.	2	456	B3 DNA Binding Superfamily	AT4G23980	57.4	8.8e-136	481.1
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT4G23980	53.3	2.5e-82	303.5
Cme02g02113	.	36	828	B3 DNA Binding Superfamily	AT5G62000	62.4	4.5e-284	974.2
Cme01g00630	.	1	288	B3 DNA Binding Superfamily	AT5G62000	69.5	8.0e-116	415.2
Cme08g00111	CCT	20	376	B3 DNA Binding Superfamily	AT5G62000	56.1	1.1e-109	394.8
Cme05g02083	CCT	23	380	B3 DNA Binding Superfamily	AT5G62000	54.0	1.3e-105	381.3
Cme08g00291	.	105	274	B3 DNA Binding Superfamily	AT1G28300	51.8	8.3e-38	154.8
Cme03g00482	.	74	276	B3 DNA Binding Superfamily	AT3G26790	55.2	2.2e-63	239.6
Cme05g02083	CCT	1	1110	B3 DNA Binding Superfamily	AT1G19220	62.5	0.0e+00	1177.2
Cme08g00111	CCT	1	468	B3 DNA Binding Superfamily	AT1G19220	59.2	2.1e-153	540.4
Cme02g02113	.	41	396	B3 DNA Binding Superfamily	AT1G19220	52.8	6.2e-105	379.4
Cme10g01685	.	26	387	B3 DNA Binding Superfamily	AT1G19220	50.7	2.8e-97	354.0
Cme08g00264	.	46	379	B3 DNA Binding Superfamily	AT1G19220	50.1	1.5e-90	331.6
Cme04g00486	.	1	841	B3 DNA Binding Superfamily	AT1G19850	60.1	3.5e-255	878.2
Cme08g00111	CCT	19	367	B3 DNA Binding Superfamily	AT1G19850	65.6	2.9e-137	486.5
Cme10g01685	.	16	357	B3 DNA Binding Superfamily	AT1G19850	52.2	3.5e-98	356.7
Cme12g01152	CCT	1	898	B3 DNA Binding Superfamily	AT1G30330	70.5	0.0e+00	1171.4
Cme08g00111	CCT	1	718	B3 DNA Binding Superfamily	AT1G30330	71.3	4.3e-272	934.5
Cme10g01685	.	23	383	B3 DNA Binding Superfamily	AT1G30330	54.0	5.0e-103	372.9
Cme07g01536	.	25	379	B3 DNA Binding Superfamily	AT1G30330	52.1	1.6e-101	367.9
Cme09g01853	.	24	397	B3 DNA Binding Superfamily	AT1G30330	50.1	1.1e-97	355.1
Cme01g00630	.	1	288	B3 DNA Binding Superfamily	AT1G30330	53.5	2.8e-82	303.9
Cme05g02083	CCT	1	1094	B3 DNA Binding Superfamily	AT5G20730	58.1	0.0e+00	1076.6
Cme08g00111	CCT	4	468	B3 DNA Binding Superfamily	AT5G20730	59.5	4.6e-151	532.7
Cme12g01152	CCT	4	469	B3 DNA Binding Superfamily	AT5G20730	59.1	4.6e-151	532.7
Cme02g02113	.	41	393	B3 DNA Binding Superfamily	AT5G20730	52.8	9.4e-104	375.6
Cme10g01685	.	6	360	B3 DNA Binding Superfamily	AT5G20730	51.0	4.7e-95	346.7
Cme12g01152	CCT	97	861	B3 DNA Binding Superfamily	AT5G37020	53.2	4.2e-187	651.7
Cme08g00111	CCT	97	464	B3 DNA Binding Superfamily	AT5G37020	77.3	4.0e-161	565.5
Cme05g02083	CCT	96	362	B3 DNA Binding Superfamily	AT5G37020	71.1	1.0e-108	391.3
Cme05g01243	.	115	472	B3 DNA Binding Superfamily	AT5G37020	58.6	1.9e-107	387.1
Cme01g00630	.	54	288	B3 DNA Binding Superfamily	AT5G37020	55.2	1.7e-71	267.7
Cme08g00264	.	149	434	B3 DNA Binding Superfamily	AT2G33860	66.2	1.1e-108	390.6
Cme11g01785	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.7	1.4e-90	330.5
Cme02g02113	.	147	436	B3 DNA Binding Superfamily	AT2G33860	51.0	1.1e-76	284.3
Cme08g00111	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	7.0e-71	265.0
Cme12g01152	CCT	127	358	B3 DNA Binding Superfamily	AT2G33860	56.9	1.2e-70	264.2
Cme05g02083	CCT	126	356	B3 DNA Binding Superfamily	AT2G33860	54.5	5.0e-69	258.8
Cme07g01536	.	130	357	B3 DNA Binding Superfamily	AT2G33860	52.4	1.9e-68	256.9
Cme04g00486	.	51	309	B3 DNA Binding Superfamily	AT2G33860	53.5	4.3e-68	255.8
Cme05g01243	.	145	376	B3 DNA Binding Superfamily	AT2G33860	54.3	9.5e-68	254.6
Cme01g00630	.	61	288	B3 DNA Binding Superfamily	AT2G33860	52.4	2.0e-65	246.9
Cme09g01853	.	129	356	B3 DNA Binding Superfamily	AT2G33860	51.1	1.7e-64	243.8
Cme11g01785	.	48	802	B3 DNA Binding Superfamily	AT5G60450	60.3	2.2e-250	862.1
Cme08g00111	CCT	7	377	B3 DNA Binding Superfamily	AT5G60450	50.9	6.9e-103	372.1
Cme12g01152	CCT	7	377	B3 DNA Binding Superfamily	AT5G60450	50.7	9.0e-103	371.7
Cme05g02083	CCT	14	374	B3 DNA Binding Superfamily	AT5G60450	50.1	1.4e-98	357.8
Cme04g00486	.	1	286	B3 DNA Binding Superfamily	AT5G60450	51.5	1.2e-78	291.6
Cme10g01685	.	5	673	B3 DNA Binding Superfamily	AT1G59750	68.5	3.4e-247	851.3
Cme07g01536	.	19	667	B3 DNA Binding Superfamily	AT1G59750	50.2	8.5e-158	554.3
Cme01g00630	.	1	341	B3 DNA Binding Superfamily	AT1G59750	63.3	3.5e-119	426.0
Cme08g00111	CCT	23	383	B3 DNA Binding Superfamily	AT1G59750	55.6	1.1e-107	387.9
Cme12g01152	CCT	23	396	B3 DNA Binding Superfamily	AT1G59750	53.4	2.2e-105	380.2
Cme05g01243	.	20	412	B3 DNA Binding Superfamily	AT1G59750	50.3	4.1e-104	375.9
Cme05g02083	CCT	23	358	B3 DNA Binding Superfamily	AT1G59750	54.4	1.0e-102	371.3
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT1G59750	51.4	6.0e-79	292.4
Cme02g02113	.	36	828	B3 DNA Binding Superfamily	AT5G62000	62.4	4.5e-284	974.2
Cme01g00630	.	1	288	B3 DNA Binding Superfamily	AT5G62000	69.5	8.0e-116	415.2
Cme08g00111	CCT	20	376	B3 DNA Binding Superfamily	AT5G62000	56.1	1.1e-109	394.8
Cme05g02083	CCT	23	380	B3 DNA Binding Superfamily	AT5G62000	54.0	1.3e-105	381.3
Cme07g01536	.	19	670	B3 DNA Binding Superfamily	AT2G46530	54.4	3.1e-178	622.1
Cme09g01853	.	18	671	B3 DNA Binding Superfamily	AT2G46530	52.7	1.9e-175	612.8
Cme10g01685	.	13	663	B3 DNA Binding Superfamily	AT2G46530	51.4	6.8e-165	577.8
Cme01g00630	.	1	326	B3 DNA Binding Superfamily	AT2G46530	73.7	1.2e-132	470.7
Cme08g00111	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	51.6	7.1e-98	355.1
Cme12g01152	CCT	1	368	B3 DNA Binding Superfamily	AT2G46530	50.1	7.4e-95	345.1
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT2G46530	50.5	1.1e-74	278.1
Cme07g01536	.	55	670	B3 DNA Binding Superfamily	AT3G61830	51.4	2.2e-159	559.3
Cme09g01853	.	54	678	B3 DNA Binding Superfamily	AT3G61830	51.3	2.3e-156	549.3
Cme10g01685	.	53	644	B3 DNA Binding Superfamily	AT3G61830	51.2	5.3e-153	538.1
Cme01g00630	.	1	324	B3 DNA Binding Superfamily	AT3G61830	72.1	2.2e-135	479.6
Cme08g00111	CCT	51	364	B3 DNA Binding Superfamily	AT3G61830	53.2	7.2e-86	315.1
Cme12g01152	CCT	51	364	B3 DNA Binding Superfamily	AT3G61830	51.4	4.4e-83	305.8
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT3G61830	51.1	2.0e-75	280.4
Cme09g01853	.	20	672	B3 DNA Binding Superfamily	AT4G23980	57.7	6.2e-198	687.6
Cme07g01536	.	1	667	B3 DNA Binding Superfamily	AT4G23980	56.4	3.2e-194	675.2
Cme10g01685	.	16	644	B3 DNA Binding Superfamily	AT4G23980	52.8	1.0e-168	590.5
Cme01g00630	.	2	456	B3 DNA Binding Superfamily	AT4G23980	57.4	8.8e-136	481.1
Cme04g00486	.	1	281	B3 DNA Binding Superfamily	AT4G23980	53.3	2.5e-82	303.5
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34310	51.4	2.1e-91	333.6
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34390	53.7	5.4e-95	345.5
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G34410	52.0	6.1e-94	342.0
Cme01g00630	.	2	310	B3 DNA Binding Superfamily	AT1G35240	53.5	5.6e-92	335.5
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G35520	51.8	2.8e-91	333.2
Cme01g00630	.	2	320	B3 DNA Binding Superfamily	AT1G35540	51.7	2.1e-94	343.6
Cme07g01536	.	25	229	B3 DNA Binding Superfamily	AT1G43950	55.8	6.8e-59	224.2
Cme09g01853	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.8	5.8e-58	221.1
Cme10g01685	.	19	227	B3 DNA Binding Superfamily	AT1G43950	51.2	3.7e-57	218.4
Cme02g02113	.	41	246	B3 DNA Binding Superfamily	AT1G43950	52.9	6.4e-57	217.6
Cme01g00630	.	2	160	B3 DNA Binding Superfamily	AT1G43950	54.7	1.4e-40	163.3
Cme11g01803	.	3	688	B3 DNA Binding Superfamily	AT2G28350	58.2	1.5e-210	729.6
Cme08g02302	.	13	696	B3 DNA Binding Superfamily	AT2G28350	54.9	3.2e-197	685.3
Cme03g01275	.	13	686	B3 DNA Binding Superfamily	AT2G28350	50.6	1.0e-171	600.5
Cme08g02302	.	14	696	B3 DNA Binding Superfamily	AT4G30080	58.5	4.1e-216	748.0
Cme11g01803	.	4	688	B3 DNA Binding Superfamily	AT4G30080	57.3	3.0e-211	731.9
Cme03g01275	.	8	689	B3 DNA Binding Superfamily	AT4G30080	54.8	1.0e-198	690.3
Cme09g01901	.	52	166	B3 DNA Binding Superfamily	AT1G01030	84.5	1.3e-53	207.2
Cme07g01632	.	62	171	B3 DNA Binding Superfamily	AT1G01030	79.5	2.1e-48	189.9
Cme10g00289	.	179	287	B3 DNA Binding Superfamily	AT1G01030	67.0	1.0e-37	154.5
Cme10g00289	.	16	344	B3 DNA Binding Superfamily	AT1G25560	62.8	3.4e-108	388.7
Cme09g00779	.	34	307	B3 DNA Binding Superfamily	AT1G25560	62.3	5.4e-90	328.2
Cme04g02367	.	41	159	B3 DNA Binding Superfamily	AT1G25560	65.5	9.7e-39	157.9
Cme09g01901	.	53	161	B3 DNA Binding Superfamily	AT1G25560	66.1	5.3e-37	152.1
Cme11g02307	.	96	211	B3 DNA Binding Superfamily	AT1G25560	62.1	7.0e-37	151.8
Cme01g00041	.	1	217	B3 DNA Binding Superfamily	AT3G19184	64.6	2.3e-67	252.7
Cme03g02021	.	6	228	B3 DNA Binding Superfamily	AT3G19184	55.1	1.3e-54	210.3
Cme03g02019	.	4	227	B3 DNA Binding Superfamily	AT3G19184	53.4	2.5e-50	196.1
Cme03g02021	.	51	226	B3 DNA Binding Superfamily	AT5G42700	57.9	3.0e-52	201.8
Cme03g02019	.	51	229	B3 DNA Binding Superfamily	AT5G42700	54.7	2.9e-47	185.3
Cme01g00041	.	62	217	B3 DNA Binding Superfamily	AT5G42700	56.3	2.2e-42	169.1
Cme11g00493	.	16	380	B3 DNA Binding Superfamily	AT3G18990	57.8	2.0e-103	372.9

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0005032	1	3	2	2	1	1	2	1	1	1	1	1	2	1	1	2	1	2	2	1	1	1	1	1	1	1	1	3	1	1	41

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	41152	PF02362	B3	9.80E-21	CL0405	Cme	TF

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cme04g00486	Cme_Chr04	FPKM	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.265958	0.0	0.0