Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00502 ATGGCTGATCATGGAGGAGGCTCAGTTTCTGGGTCGTCAAGATTTTGGTGTTCAATTCCTGAGAAACTTCAACTCCATGGCGCCATGTTGGCCTTGCAATTCGGCTATGCTGGATTTCACGTTGTCTCAAGAGCTGCCCTTAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTATAGGAACATCATTGCCTTTTTCCTTCTCCTTCCCTTTGCCTATTTCCTCGAAAAGAAGGAACGTCCTCCCATTTCTTTCAATTTTCTTCTTCAGTTCTTCCTTCTTGCCCTTGTTGGAATCACGGCAAACCAAGGATTCTACTTGCTAGGTTTGGAGAACACATCACCGACGTTTGCTTCAGCAATACAAAACTCGGTTCCGGCCATAACATTCCTCATGGCTGCATTACTCCGAATAGAACAAGTGAGACTAAACAGAAAAGATGGTATAGCAAAAGTGCTGGGAACAATATGCTGTGTAGCTGGGGCCACAGTGATCACTCTTTACAAAGGTCCAACAATATACAGCCCAACTCCTTCACTCCAAATTACACCCATCACCACCGCACCCATTTTCGCTTCACTTGGGGACGCAACCGGGAAAAGCTGGACCCTTGGCTGCGTCTTTTTGATCGGTCATTGTTTGTCTTGGTCTGGATGGCTTGTTTTGCAAGCACCCGTCTTGAAAAAATACCCAGCTCGTCTCTCTGTCACTTCCTACACTTGTTTCTTTGGAATAATCCAATTTGTCATCATCGCTGCCATTGCCGAGCGTGATGCTCAGGCTTGGCTCTTTCACTCTGGTGGTGAAATTTTTAGCGTCCTGTATGCGGGAGTGGTAGCGTCGGGAATTGCTTTTGCTGTACAGATATGGTGTATTCAAAGAGGTGGGCCGGTGTTCGTTGCGGTTTATCAACCAGTTCAGACATTGGTTGTCGCTGTCATGGCTTCCTTCGCCTTGGGGGAACAGTTCTTCTTGGGAGGGATCATCGGAGCGGTATTGATCATCGCCGGTTTATACTTCGTTCTTTGGGGAAAAAGCGAAGAGAGAAAATTTGCACTCGAGAAGGCTGCCATCCTCTCTGCTCCCGACCACAGTGGTAACAATCGAACACCTCCACACATCATCAAGCCCTCCTCCATTACTCAGCCACTTCTCATCCATTCTTCAAACGACAACGTTTGA 1182 46.87 MADHGGGSVSGSSRFWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFFLLLPFAYFLEKKERPPISFNFLLQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVLGTICCVAGATVITLYKGPTIYSPTPSLQITPITTAPIFASLGDATGKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEQFFLGGIIGAVLIIAGLYFVLWGKSEERKFALEKAAILSAPDHSGNNRTPPHIIKPSSITQPLLIHSSNDNV 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4070978 4074895 - MELO3C003783.2.1 Cme04g00502 324763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00502 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 347 - -
Cme04g00502 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 169 - -
Cme04g00502 393 PANTHER WAT1-RELATED PROTEIN 16 364 IPR030184 GO:0016021|GO:0022857
Cme04g00502 393 PANTHER WAT1-RELATED PROTEIN 16 364 - -
Cme04g00502 393 Pfam EamA-like transporter family 30 166 IPR000620 GO:0016020|GO:0016021
Cme04g00502 393 Pfam EamA-like transporter family 204 342 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01914 Cme04g00502 CCT
Cme03g01914 Cme04g00502 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01709 Cme-Chr2:24145488 Cme04g00502 Cme-Chr4:4070978 5.21E-136 dispersed
Cme04g00502 Cme-Chr4:4070978 Cme10g00733 Cme-Chr10:4653085 2.09E-84 dispersed
Cme07g00805 Cme-Chr7:7598776 Cme04g00502 Cme-Chr4:4070978 8.79E-69 dispersed
Cme05g01521 Cme-Chr5:24596901 Cme04g00502 Cme-Chr4:4070978 3.46E-74 transposed
Cme03g01914 Cme-Chr3:27258768 Cme04g00502 Cme-Chr4:4070978 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00502 - - csv:101218486 746.117