Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00607 ATGTCTATTCTTCTTGTATCTGTTCTTCTATTTTTCACAATCTTCATCTTCAAATTTCTCTACTCCAATTTTTGGGTTCCATGGAGAATTCAAATCCATTTCCAAAAACAGGGTATAACAGGGCCTTCCTATCGTCCGATCATCGGTAATGCTACCGATATCCGCCGTTTGTACATAGAGGCACAAGCAAAACCAATCCCATTAACCCATGATATAGTATGTCGGGTGCTACCTTATATTCACCAATGGTCTAAAGAGTATGGAAAGATGTTTGTGTATTGGTTTGGACCAAAGCCGAGGCTGACAATATCTGACCCAGATATGATTAAGGAAGTGCTTATGAATACTGGTGGACCTTTCAGAAAGGTTGGATTCACTCCAGTTTCCAAGTTGCTATTTGGTGAAGGACTTGTCGGACTTGAGGACGAACAATGGGTCGTTCATCGAAGAATCGCAAATCAGGCTTTCACTATCGATCGGGTCAAGGGATGGTTGCCCGAGATTGCAACGAGTGTTCGTAATGTGTTGGAGAAATGGGAAAAAATGAGAGGAGGAAATGAAGAGTTTGAATTAGACGTTCATAAACAACTTCGTAACCTCACAGCAGATGTAATTTCAAGAACTGCATTTGGAAGTAATTTTGAAGAAGGCAAACGAATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTTCAGGCAGTCTCATCTGTTTATATTCCAGGCTACAGATTTTTACCTACCAAGACGAATAGAGAAAGGGAGAGGCTAGAAAAAGAAACTCGTGCCTCAATAAAAACACTGGTTGAAAGCGAGGAAAACAACAAAGAAAGGGAAAAATCAACTAACCTACTCAGCCTATTGTTGTCATCATACAAGGGCCAGAATGGAGAAATAGAAAAACTTAGAGTGGATGAAGTTGTAAACGAATGCAAGACATTCTATTTTGCAGGAATGGAAACAACTGCAAATCTTTTAACTTGGGCTCTTTTACTACTAGCAGAACATCAAGAATGGCAAGACCGAGCTCGAGAAGAAGTCATCAATGCTTGTGGCCAAAAGATGCCGCCTACAACAAATAATTTAACCGAACTTAAACTAGTGGGTATGATAATCAATGAAACACTTCGACTTTATCCTCCAGCGGTGATGATGATGCGGCGGACAATGAAACACTTAAGATTAGGAAAAGTCGACGTTCCAGAAGGCACACAACTTCAACTTTCAGTGGTTGCAATCCACCATGAAAAAGAGCTTTGGGGAGAAGATGCGAGTAGCTTCAACCCTATGAGATTTAGTGAGTCTAGGAAGCATATGGCCTCATTTCTACCATTTGGGCTGGGGCCAAGAATATGTGTAGGACAACATTTGGCTTTAATTGAGGCGAAAGTTGCATTGGCTATGATAATTCAACGATTCTCTTTCACCGTTTCACCAACCTACACACATGCTCCCATGATGTTTGTAAGCTTAAACCCCCAGTTTGGTGTTCAGCTCCTTGTTAGGAGCTTATGGAATTGA 1521 40.63 MSILLVSVLLFFTIFIFKFLYSNFWVPWRIQIHFQKQGITGPSYRPIIGNATDIRRLYIEAQAKPIPLTHDIVCRVLPYIHQWSKEYGKMFVYWFGPKPRLTISDPDMIKEVLMNTGGPFRKVGFTPVSKLLFGEGLVGLEDEQWVVHRRIANQAFTIDRVKGWLPEIATSVRNVLEKWEKMRGGNEEFELDVHKQLRNLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKTNRERERLEKETRASIKTLVESEENNKEREKSTNLLSLLLSSYKGQNGEIEKLRVDEVVNECKTFYFAGMETTANLLTWALLLLAEHQEWQDRAREEVINACGQKMPPTTNNLTELKLVGMIINETLRLYPPAVMMMRRTMKHLRLGKVDVPEGTQLQLSVVAIHHEKELWGEDASSFNPMRFSESRKHMASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTVSPTYTHAPMMFVSLNPQFGVQLLVRSLWN 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5831833 5834696 + MELO3C003872.2.1 Cme04g00607 324868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00607 506 Pfam Cytochrome P450 79 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 Gene3D Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00607 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 499 - -
Cme04g00607 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Cme04g00607 506 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 6 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00603 Cme-Chr4:5740251 Cme04g00607 Cme-Chr4:5831833 0 dispersed
Cme04g00607 Cme-Chr4:5831833 Cme05g01942 Cme-Chr5:28013128 4.72E-146 dispersed
Cme04g00607 Cme-Chr4:5831833 Cme04g00609 Cme-Chr4:5866560 0 proximal
Cme04g00606 Cme-Chr4:5825061 Cme04g00607 Cme-Chr4:5831833 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00607 - - csv:101210785 902.123