Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00609 ATGTATCTTCTTTTTCTTCTTCTTCTTCTTCTTATTACAATCCTTCTCAAATTTCTCTACTTCACTTTTTGGCTTCCATGGACAATTCAAATCCACTTCCGAAAGCAGGGCATAACAGGTCCTCCCTACCGTCCCTTCATCGGCAATTCCGCCCATATCCGCCGTCTGTTCAAGGAGGCACTATCCAACCCCATTCCCTTTCACCATGATATACTCTCCCGCGCTCTCCCTTTTTACTTTCAATGGTCCCGCGAGTACGGAAAGACGTTCCTCTACTGGTTCGGCTCCAAACCCAGATTAGCCATATCCGACCCTGATCTGATTAAGGAAGTCCTTCTGAATACGGGCGGGTATTTTCGAAGGGTCCACTTCAATCCACTGTCCAAGGTGCTTTTCGGAGAGGGACTTATCGGACTAGAGGGAGAAAAATGGGTGACGCGCCGGAGAATTGCAAATCAGGCTTTCAATATAGAACGAGTAAAGGGATGGGTTCCCGAAATTGTTGTTAGTGTGTTGAGTGTGTTGGAGAAATGGGAAGAGATGAAAGGTGGAATGGAGGAGTTTGAATTGGACGTTCACAAAGAAGTTCGTCGTCTCTCAGCAGACGTTATTTCAAGAACTGCATTTGGAAGTAACTTTGAAGAAGGAAAGCGCATCTTCAGTTTGCAGGAACAACAAACATATCTTTTCTCCCAAGCAATCAGAAGCGTTTATATTCCTGGCTTCAGATTTTTGCCAACCAAGAAGAACAGAGAAAGGTGGAGCCTGGAGAAAGAAACCCGTGAATTGATAAAAGTGCTGATTGAGACAAATAGCAAAGGAAGGGAAAACTCAACTAATCTACTTAGCATGTTAATGTCATCTTACAAGAACCAGAATGGGGAAGAAGAAAGGCTTGGGATGGAGGATATCATTGATGAGTGTAAGACATTCTATTTTGCAGGAATGGAAACAACTGCTCATCTTTTAACTTGGGCACTTTTGCTACTGGCAAAGCATCAAGAATGGCAAGACAAGGCCCGAGAAGAAGTTCTCAAAATCTGTGGGTACAAAACACCTCCTGCAGCTGAGAATTTGAATGAACTTAAACTTGTAGGTATGATAATTAATGAAACGCTTCGACTTTATCCTCCAGCAGTGATGTTGACGAGGAAGGCATCAAAACAGCTGACACTAGGAAGCTTAGACATTCCTGCTGGCACAGAGCTTTACCTGCCATTGGCTGCCGTCCACCATGACAAAGAGTTTTGGGGAGAGGATGCAAACTGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACATTTAGCTTCATTTCTGCCATTTGCGTTAGGTCCCAGAATTTGTGTAGGCCAAAACTTGGCATTGATTGAAACCAAAGTCGCTTTGGCTATGATGATTCAACGATTCTCTTTTGCTGTTTCTCCAACCTATACTCATTCCCCCATGCTGTTCATAACCTTACAGCCTCAGTTTGGTGCTCAGCTCCTTTTTAGGAGCCTATGGAATTGA 1512 43.92 MYLLFLLLLLLITILLKFLYFTFWLPWTIQIHFRKQGITGPPYRPFIGNSAHIRRLFKEALSNPIPFHHDILSRALPFYFQWSREYGKTFLYWFGSKPRLAISDPDLIKEVLLNTGGYFRRVHFNPLSKVLFGEGLIGLEGEKWVTRRRIANQAFNIERVKGWVPEIVVSVLSVLEKWEEMKGGMEEFELDVHKEVRRLSADVISRTAFGSNFEEGKRIFSLQEQQTYLFSQAIRSVYIPGFRFLPTKKNRERWSLEKETRELIKVLIETNSKGRENSTNLLSMLMSSYKNQNGEEERLGMEDIIDECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLKICGYKTPPAAENLNELKLVGMIINETLRLYPPAVMLTRKASKQLTLGSLDIPAGTELYLPLAAVHHDKEFWGEDANCFNPLRFGEPRKHLASFLPFALGPRICVGQNLALIETKVALAMMIQRFSFAVSPTYTHSPMLFITLQPQFGAQLLFRSLWN 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5866560 5869532 + MELO3C003874.2.1 Cme04g00609 324870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00609 503 Pfam Cytochrome P450 78 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 496 - -
Cme04g00609 503 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 5 496 - -
Cme04g00609 503 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00609 503 Gene3D Cytochrome P450 23 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01253 Cme-Chr2:18089174 Cme04g00609 Cme-Chr4:5866560 8.08E-90 dispersed
Cme04g00606 Cme-Chr4:5825061 Cme04g00609 Cme-Chr4:5866560 0 dispersed
Cme04g00609 Cme-Chr4:5866560 Cme05g01942 Cme-Chr5:28013128 2.34E-147 dispersed
Cme09g00147 Cme-Chr9:1077161 Cme04g00609 Cme-Chr4:5866560 5.22E-118 dispersed
Cme04g00607 Cme-Chr4:5831833 Cme04g00609 Cme-Chr4:5866560 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00609 - - csv:101205457 921.383