Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00634 ATGTTCTCAAAAGCCTTCACGTTTAGTAAAAACATTCAGGACTTGGCTTCTGAAATGTTCCCAGGCCAAGTTGAAGCTGCTTTAAAAGAACCTCCTGGTGCCAAAACGGCGCCGGATAGAGTTATCGTCGCCGTCAAGGCTGAGAGAGTGATTTCCAAATCTGCACTGGCTTGGGCTCTTACTCATGTCGTCCGTCCTGGTGACTGTATAACTCTACTCGCCGTCTTCTCAGTCGAGAAAACTGGCAGAAGATTCTGGAATTTCCACAGATGGAGCGGGGATTGTGCGAGTGCTGTCCAAGAGAATCTGCCGGATCGGGTACAGGAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCATTTCCACAATCAAGTTGAGGTTCAAGTGAGGATTAAAGTGGTTACAGGAACACAAGGAGGATCTGTCGCTTCTGAAGCAAAGTTAAAAGGAGTTAACTGGGTCATACTAGACAGGAAATTGAAGAATGAGGTAAAGAGTTGTCTCGAAGAACTTAGCTGCAATATTGTTACTATGAAAGGGTCTCAACCGAAAGTTCTGAGACTTAACTTGGAGTGCTGGAGTGAACCTCAAACTCCCTTTTTTTCAGCTAATTCTTCTCCTGTTCGAAAAGTTCAACAAAATAGGATGAAGCAGACAACTCCATTAGCAAGCAGACCAGAAGAAGAACCCGGTGCCTCATTCCGAAAATCTTCAAAAGAAGTGTCAAAATTGGGTACTGAGGCGGTGTCTTCTATTTTCCTTGTATATGAGCAAAACCCGCTATATGAAGGAAACTTGAAAGGAAATCATTTGCCGATTAATGAGACTAACGATTTAAGCATGTCATTATCTTCATCCACCCAAATGGAAGAAAAAGTTCTCTCTCTACCTCCAACATCTGTGGCCTCAAATCAAAAATGTGTCTATTGGATTTCTCAGAACCATAACATTTCGGAAGGAAAAACTTTATCCAAGTCCAAAAGAAGATTCCTTAGATTTGCATCAACTCCCAAGGTGCCATTCAGTAATCCTACAAGTCTTGAGAAGTGTACGACTTTTGAAGATATGAGGCTCAACCAGTCTGAGAGAAAAGACTACATTGTGGATTCAAATATCAGGGATGCTGTCTCCTTGGGCAGAGCATCCTCTGCACCACCTCCTCTGTGTTCAATATGTCAACACAAGGCTCCAGCTTTTGGAAAACCTCCTAGACAGTTCTCACTCAAAGAGCTCGAAGAAGCAACTGACAGATTTTCAGATATGAACTTCTTGGCAGAAGGTGGTTTCGGAATTGTACATAGAGGAATCTTGAGAGATGGCCAAGTTGTAGCCGTGAAGCAGTTGAAATGTGGAGGCTTACAAGCAGATGCTGATTTTTCTCGGGAAGTTCGAGTATTGAGTTGCGCACAACATAGAAATGTTGTGTTGCTGATTGGATTTTGTATAGAGGACACAACGAGGTTATTGGTTTATGAGTACATATGCAATGGTTCGTTGGATTTCCATTTACATGGGAATGGAAGCCAGTTAGATTGGCATTCAAGGCAGAAAATAGCAATAGGAGCAGCACGGGGTTTGCGTTATCTTCATGAAGATTGCAGAGTCGGATGTATAGTGCATAGAGACATGAGACCTCACAATATCCTCCTAACACATGATTTTGAACCCATGGTTGCTGATTTCGGACTGGCGAGATGGCATTCTAAATGGTCTACCAGTGTTGAGGAGCAAGTTATTGGAACTTCAGGGTATCTAGCACCAGAGTACATCAATGGCGGTATGGTATCACATAAAGTGGATGTGTATGCATTTGGCATGGTTTTATTAGAGTTGATTAGTGGCAGAAGAAGCTGTGAGCTACACCGTCTAGAGGGAAAACAATTCATATCAGATTGGTTCCACCCCATCTCTGCCTTGCAAATTCAACATTTACTAGCTAGTAGTAATCATTTAGTCGATCCATGCATGGCGTCCGAGCAATCCCCCGACTTCTATTATCAACTGCATTCTATGGTTCGTGCCGCGTCCTTGTGTCTATGTCCAGATCCTGAATCAAGACCCTCAATGTCAAAGATTCTTCGAGTACTCGAAGGAGGAGATCCAGTTGTTCCTCTTGGTTTAGACTTCGACCCAGTCGGCTGCAGAAGTGCACACTTGGACGGTTTGACGTCTCACAACCAAATCGAAGCAAGAAGAAGCCATACTCGTACACTCTCACAATGA 2223 43.45 MFSKAFTFSKNIQDLASEMFPGQVEAALKEPPGAKTAPDRVIVAVKAERVISKSALAWALTHVVRPGDCITLLAVFSVEKTGRRFWNFHRWSGDCASAVQENLPDRVQEISESCSQMVLHFHNQVEVQVRIKVVTGTQGGSVASEAKLKGVNWVILDRKLKNEVKSCLEELSCNIVTMKGSQPKVLRLNLECWSEPQTPFFSANSSPVRKVQQNRMKQTTPLASRPEEEPGASFRKSSKEVSKLGTEAVSSIFLVYEQNPLYEGNLKGNHLPINETNDLSMSLSSSTQMEEKVLSLPPTSVASNQKCVYWISQNHNISEGKTLSKSKRRFLRFASTPKVPFSNPTSLEKCTTFEDMRLNQSERKDYIVDSNIRDAVSLGRASSAPPPLCSICQHKAPAFGKPPRQFSLKELEEATDRFSDMNFLAEGGFGIVHRGILRDGQVVAVKQLKCGGLQADADFSREVRVLSCAQHRNVVLLIGFCIEDTTRLLVYEYICNGSLDFHLHGNGSQLDWHSRQKIAIGAARGLRYLHEDCRVGCIVHRDMRPHNILLTHDFEPMVADFGLARWHSKWSTSVEEQVIGTSGYLAPEYINGGMVSHKVDVYAFGMVLLELISGRRSCELHRLEGKQFISDWFHPISALQIQHLLASSNHLVDPCMASEQSPDFYYQLHSMVRAASLCLCPDPESRPSMSKILRVLEGGDPVVPLGLDFDPVGCRSAHLDGLTSHNQIEARRSHTRTLSQ 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6199318 6204483 - MELO3C003898.2.1 Cme04g00634 324895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00634 740 ProSiteProfiles Protein kinase domain profile. 418 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00634 740 ProSitePatterns Tyrosine protein kinases specific active-site signature. 538 550 IPR008266 GO:0004672|GO:0006468
Cme04g00634 740 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 35 731 - -
Cme04g00634 740 MobiDBLite consensus disorder prediction 203 221 - -
Cme04g00634 740 MobiDBLite consensus disorder prediction 203 240 - -
Cme04g00634 740 Pfam Protein kinase domain 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00634 740 Gene3D Transferase(Phosphotransferase) domain 1 494 701 - -
Cme04g00634 740 Gene3D Phosphorylase Kinase; domain 1 389 493 - -
Cme04g00634 740 SUPERFAMILY Protein kinase-like (PK-like) 400 696 IPR011009 -
Cme04g00634 740 PANTHER OS01G0253100 PROTEIN 35 731 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00224 Cme-Chr2:1798667 Cme04g00634 Cme-Chr4:6199318 7.85E-180 dispersed
Cme03g00434 Cme-Chr3:6082409 Cme04g00634 Cme-Chr4:6199318 1.87E-88 dispersed
Cme04g00634 Cme-Chr4:6199318 Cme05g01976 Cme-Chr5:28312913 2.66E-77 dispersed
Cme04g00634 Cme-Chr4:6199318 Cme04g01192 Cme-Chr4:16312530 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64796 PF00069 Pkinase 5.20E-42 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00634 - - csv:101207605 1480.31