Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00638 ATGGGAAGCCATAGAGCAGTGGTCGTAAGCAACTGGGAAATAGCGAAAGAGTGTTTTACTACAAACGATAGAGTATTTGCCTCTCGTCCCAAGCTTGTAGCCGCAAAGCATATGGGCTATAATAATACCATGTTTGCTTTCACCCAATACGGCCCATTGTGGCGTCATATCCGCAAAATAGCCATTCATGAGATTCTCTCTAACCAACGCCTTGACCTTTTCCAACACATTTACAAGTCGGAGATTCAAGTCTCGATAAAAAAACTGTATGAGTTATGGGTGGTCAATGGAAGCGGCAAAGTGTTGGTGGAGATGAAGAATTGGTTTGGAGAATTAACTTTGAACACCATATTTAGGATGGTGCTTGGAAAGCGATTTTCGACAACGGTTGAAGGGAGCAGCAACGAGGGCACTGACGAAGGCGAGCAGTTCCGACAGGCCTTGAGTGATTTTCTTCAACTGTTTATGGCTTTTATTCCGTCAGATTCGTTTCCGTTTTTGAGTTGGTTGGATTTGGGAGGGTATGAAAAGGCGATGAAGAAGACAGCCAAAATTCTAGACAAGACGCTTCATAAATGGCTAATAGAACATCAACAAAAGAGAGATTATAATAATTGTGGCGATGCAGTCCACAAGGAAGAGGACTTTATGGATGTGATGCTGTCCACTGTTCAAGATGTTGAAGAACTTGCCGGCTATGATGTTGGTACCATCACAAAAGCCACATGTTTGACTCTAATATTGGGTGGAGCAGAGACTACGCAAACAACTTTGACTTGGGCTCTTTGTTTGCTCCTTAATAATAATGAAGATGTATTAATGAAGGCCCAACTTGAGTTAGACGAACAAGTAGGTAGAGATAGGTTGGTATCGGAGTCGGATGTGAAAAATTTGTTGTATCTTCAAGCAATTATAAAGGAGACAATGCGTTTATACCCTGCTGCACCACTTGCAGCCATGCATGAGGCCATGGAAGATTGTAATCTTGTTGGTTACCACATTCCTGCAAAGACACGTTTAATAGTGAATCTCAAAAAGCTTCAAAAAGATCCACTTGTATGGGAAGATCCCGATGAATTTCGACCAGAGAGATTTCTTACAACACATAAAGATTTCGATGTCAGAGGACAACATACCCAGTTCATACCTTTCGGGAGTGGTCGAAGGATGTGCCCGGGAGTTTCATTTGCCAACCAAGTAATGCATCTAACGCTGGCAAATCTACTTCATGGGTTTGAAATTCGAAGGCCATCTCAGGAGCTAATCAATATGGAAGAGAAGGTTGGATTAACCAGTATGAAAACAACCCCACTTGAAATTTTTTTAACTCCACGTCTTCCTGCACAAGTTTATGTGTAA 1359 41.94 MGSHRAVVVSNWEIAKECFTTNDRVFASRPKLVAAKHMGYNNTMFAFTQYGPLWRHIRKIAIHEILSNQRLDLFQHIYKSEIQVSIKKLYELWVVNGSGKVLVEMKNWFGELTLNTIFRMVLGKRFSTTVEGSSNEGTDEGEQFRQALSDFLQLFMAFIPSDSFPFLSWLDLGGYEKAMKKTAKILDKTLHKWLIEHQQKRDYNNCGDAVHKEEDFMDVMLSTVQDVEELAGYDVGTITKATCLTLILGGAETTQTTLTWALCLLLNNNEDVLMKAQLELDEQVGRDRLVSESDVKNLLYLQAIIKETMRLYPAAPLAAMHEAMEDCNLVGYHIPAKTRLIVNLKKLQKDPLVWEDPDEFRPERFLTTHKDFDVRGQHTQFIPFGSGRRMCPGVSFANQVMHLTLANLLHGFEIRRPSQELINMEEKVGLTSMKTTPLEIFLTPRLPAQVYV 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6323797 6326548 - MELO3C003899.2.1 Cme04g00638 324899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00638 452 SUPERFAMILY Cytochrome P450 1 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 259 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 302 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 14 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 343 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PANTHER CYTOCHROME P450 82C3-RELATED 1 451 - -
Cme04g00638 452 Pfam Cytochrome P450 1 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00638 452 PANTHER CYTOCHROME P450 1 451 - -
Cme04g00638 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Cme04g00638 452 Gene3D Cytochrome P450 1 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00638 Cme-Chr4:6323797 Cme04g00661 Cme-Chr4:6859592 0 dispersed
Cme04g00637 Cme-Chr4:6323767 Cme04g00638 Cme-Chr4:6323797 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00638 - - csv:101212495 862.448