Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00661 ATGGAACTTCTTCAGTTCTCTTCACCGGACACGGTTACTGGAATCTTCGCCCTCATCATCTTTCTCTATGCTCTATTCAAGATATATAGAGGAGGAGTCGGAGCTCGTCATCGGAAGCGACTGCCACCGGAAGTCGGTGGCGCATTGCCGCTGATTGGCCACCTCCATCTTTTAGCTAAAAATGAACCAGCTCACAAAACGTTTGCCAAAATGGCTGATGCATATGGGCCAATTTTTACGTTGAGATTGGGTTTGTACACAAACTTGATTGTGAGCAATTGGGAAATAGCGAGAGAGTGTTTTACTACAAACGACAAAATCTTTGCCTCTCGTCCAAAGCTCGTGGCCTCAAAGTTGTTGGGGTATGACTATGCCATGTTTGGGTTGAGCCCATATGGTCCACACTGGCGCCATGTTCGTAAGTTAGCCATGCTCGAACTATTGTCGAACTATCGCCTGGAGAAGCTCCAACACATAAGGGTATCCGAGGTCCAAACTTCGATGAAGAATTTGTACGAGTTATGTCTAAAAAATAAGAAGAATGCATTGGTGGAGATGAAGACATGGTTTGGAGATATAACTCTAAACACCATTTCTAGGATAGTGGTTGGAAAGAAATTCTCGACCGCCGTGGATGCAAGTAATAATGAAAACGAAGAATATCGGAAGGCGTTGAGGGATTTCTTCGAATGGTTTGGAGTATTTGTTCCTTCAGATTCGTTTCCATTTCTAAAGTGGTTGGATTTGGGTGGACATGAGAAAGCCATGAAGAAGACTGCCAAAGTTCTTGATGAGGTGTTTGATAAATGGATTCAAGATCATAAAAATAATTTGGGTGAAGTGAAGATGGAAGAACATGACTTCATGGATGTGATGCTTTCTAACGTTAGAGATGACGGACAACTTTCTAAATACGATGCTCATACTGTCACCAAAGCTACATGTTTGAGTCTTATATTGGCTGGATCTGACACTACAACAGTTACAATGATATGGGCTCTTTCTTTACTTCTTAACAATCAAGAAGTACTTAAGAGAGCTCAACTTGAATTGGACGAACGTGTTGGGAGACAAAGACAAGTGAAAGAATCCGATGTAAAGAACTTACTGTATCTTCAAGCTATTGTGAAAGAAACATTACGTTTATATCCAGCAGCGCCAATTCTAGTCCCTCATGAATCAGTTGATGATTGTGTCGTCGCTGGTTACCATATTCCGGTAGGAACACGATTGATAGTGAATGTTCAAAAGCTTCAAAGAGACCCACAAATATGGGAGGATCCTTGTGAGTTTCGACCAGAAAGATTTTTAACAAGTGCAAAGGATTTTGATGTTAGAGGACAGAATCCCCGGTTAATACCATTTGGAAGTGGTCGACGAATGTGCCCTGGAATCTCGTTTGCTCTACAAGTGATGCATTTAGCACTTGCCAATTTACTTCATGGGTTTGAAATTAGTAGGCCAAGTAAAGAGTTTCTGGACATGGAGGAGAGTGCTGGAATGACGAGTATTAGAAAGAATCCACTTGAAGTTGTTTTAACTCCTCGCCTTCCACCTCATGTTTATGAATGA 1572 41.67 MELLQFSSPDTVTGIFALIIFLYALFKIYRGGVGARHRKRLPPEVGGALPLIGHLHLLAKNEPAHKTFAKMADAYGPIFTLRLGLYTNLIVSNWEIARECFTTNDKIFASRPKLVASKLLGYDYAMFGLSPYGPHWRHVRKLAMLELLSNYRLEKLQHIRVSEVQTSMKNLYELCLKNKKNALVEMKTWFGDITLNTISRIVVGKKFSTAVDASNNENEEYRKALRDFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAKVLDEVFDKWIQDHKNNLGEVKMEEHDFMDVMLSNVRDDGQLSKYDAHTVTKATCLSLILAGSDTTTVTMIWALSLLLNNQEVLKRAQLELDERVGRQRQVKESDVKNLLYLQAIVKETLRLYPAAPILVPHESVDDCVVAGYHIPVGTRLIVNVQKLQRDPQIWEDPCEFRPERFLTSAKDFDVRGQNPRLIPFGSGRRMCPGISFALQVMHLALANLLHGFEISRPSKEFLDMEESAGMTSIRKNPLEVVLTPRLPPHVYE 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6859592 6861708 + MELO3C026491.2.1 Cme04g00661 324922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00661 523 PANTHER CYTOCHROME P450 82C3-RELATED 39 523 - -
Cme04g00661 523 SUPERFAMILY Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cme04g00661 523 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 PANTHER CYTOCHROME P450 39 523 - -
Cme04g00661 523 Gene3D Cytochrome P450 33 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g00661 523 Pfam Cytochrome P450 43 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00637 Cme-Chr4:6323767 Cme04g00661 Cme-Chr4:6859592 0 dispersed
Cme04g00638 Cme-Chr4:6323797 Cme04g00661 Cme-Chr4:6859592 0 dispersed
Cme04g00651 Cme-Chr4:6588915 Cme04g00661 Cme-Chr4:6859592 2.10E-158 dispersed
Cme04g00654 Cme-Chr4:6652981 Cme04g00661 Cme-Chr4:6859592 1.77E-153 dispersed
Cme04g00661 Cme-Chr4:6859592 Cme04g00667 Cme-Chr4:7061271 0 dispersed
Cme04g00661 Cme-Chr4:6859592 Cme04g00662 Cme-Chr4:6890499 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00661 - - csv:101208335 973.0