Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g00738 | GGAAAACTTGAAGCAACAACATCAACCAAAACACCCCCTTCAAACTTCTTCATAATCTTTCCTTCTCCTCCTCCTCCTCCTCCTCCTACTCCTTCTTCCCTTCTTTTGTTAATGGACCGGGGTTTTGGCAAAATGATGTTATCTGCATCGCCATCGACGATAGCTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCCACTTCGAAGGCTCGGATTCCGCCGGTGAGGCGGGCTTTACCCGTCAATTTCAAGGTTAATGATGACGGTTCCTCAGAGTGTTCTATTAACGTCTTTAATGGAAGGGAGGATGCAATAAGGAAGGAGAATGGTTTGGGTAACTTTGCATTCAGGAGAATAAATAGAGATCAAGATGATGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATAGAGATCAAGTGAATGTTGCTTCTGCTTTACTTTCACATATTCAAGGCTCCAACTGGGAGGACAATATCAGTTATTTTCTTCAGAAGAAACTGCGGGTTTGGTGTCAACTTCCAACTGGACAATGGGAGTTAGGAACTATACAGTCAAACAGTGGGACGGAGGCATGTATCATGCTCTCAAACAAAAAGGTTGTTAAAGTTTCAACAGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTACAGCTCGGTTATTTGAACGAGCCTTCGAGTAATGCAGGGTCAGTTTTGATTGCAATCAATCCCTTAAAAGACACTAAACAGTATGGAAATGGATTAATTGCAGCCTATAGACAAAAAGTCATGAACAACCCTCATGTTTATGCTATCGCTGATTCTGCCTATTCTGCAATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGCGGAGAAAGTGGAGCTGGCAAAACTGAGACAGCAAAAGTTGCTGTTCAATACCTGACTGCTTTTGGTGGTGGCAACGGCATAGATGATAGAATCCCACAGGCAAATGTTATACTGGAAGCGTTTGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTTCAAGAGTTGTTCAGCTGGTCAATAGTGAGAGATCATTTCATGTCTTTTATCAACTTTGTGCTGGAGCACCATCTACACTTAAAGAGAAATTGAATATCAGAGTGCCCAGTGAGTACAGTTACCTTAATCAGAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATATACTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCGGTTTTGTGGATAGGAAACATTACGTTTCAAATAATTGATAGTGAAAATCATGTGGAGGTGATGGCTAATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGATAGCATTGCTAAAAAAATGACTTTACGACAGGCAACCTATGCAAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTCGACTGGGTTGTAGAACAGATCAACAAGTCACTTAAACCAAGAATGGAGCATTCTGGAAGTTCCATAAATATCCTCGACTTCTTTGGGTTTGAGTCATTTAAGGCATGGTTTTTTACTCATCTATGTGTATTTTCTATGCAACAATATGTTATGGTGATTATCTTGTTGTCTCCAATTCAGAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTAGTAGGCACATGTTCAAACTTCAGCAAGAGGACTACGAATTGAATGGTGTTGATGGCACAAAAGTCAACTTTGAAGACAATCTAGAGTGTTTGAATCTTATTGAGAAGAAACCTCATGGAGTTCTAGCTTTGTTGGACGAAGAGTTAAATTTTGCCAAAGCTACTGATCTTACATTTGCTAATAAACTAAAGCAACACTTAAAATCTCAACCTCGCTTTAAAGGGGAAAGAGGCAGGGCTTTCGGTGTTCGCCATTATGCTGGAGAGGTTGTATACGATACAAATGGGTTTCTGGAGAAGAATAGAGATCTGCTGCATTCAGCTTCCATCCAACTCCTTTCATCATGTACTTGCAAGCTACTGCAATTACTTGCCTCAAAAATGATTAACCAGTCCCACAAACCAACAGTTTCAGTGGGCTCTACAGAAATAGTAGAATCCCCTGAGCCAGGTGTTGGAACCAAGTACAAGGTTCTACTATTTGACCTATTTCATAAATTGGAGAGCACCAACCATCATTTCATTTGTTGTATAAGACCGAACAGAAATCAAGTTGGTGGCTTATTCGAGGAGGACCTCGTCTTACAACAGCTTAGATACTGTGGAATTTTGGAGGTTGCCAGAATTTCAAGATCAGGATATCCTACCAGGATGACACATCAAGAATTTGCTGGAAGGTATGGTTTCCTCCTTAAAGAAACCAGTGTATCCCGAGATTCATTGAGTATATCAATTGCTGTTCTGCAACAATTTAATATCCACCCCGAGATGTACCGTGTTGGTTATATCAAACTATTTTTCCGTACAGGCCAGATTAGGGCATTGGATGAAAGGAAGAAGCAAGTTATGCAAGGCATCTTAGGAATACAAAAGTACTTTCGTGGTTGCCATGCCCGTGGAAACTTCCATGATCTTAAGCAAGGGGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTACCGTGAAGAGGTTCTCATTTGTTGTGTATGCCTTCAGTGTTCCTAAGAAGGTCTATGAAGTTCAGGCAATCATACGATTACAATCTGTAATACGTGGTTCGTTGGCTCGAAAGCATTTGAGCATGCGTGATTCGAAGAGGTTTCATGAAAACAAAAAAACTAAATTGAACAAAGGCAGAAGGGTTTCAGAGGAAGAGTTTCAAGAACGGGCTCAATCCCTACCAACAAGTCTGACTGAGCTTCAAAAGAAGGTCGTGGAGGCAGAAGCAACCATAGAGAAAAAGGAAGAGGAAAATGCCGCACTGCGGGAGCAAGTAAAACAATTCGAGTCTAGGCGGCTAGAATATGAAGCTAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAGAAGACACTTGCTGCTGAAAATGCAGCCCCACCTGGAAGAGTTGATGCCTGTAACTCACCACCTCACTATTACGATTCTGAGGATACGACGTCAATGGGATCTCGAACTCCTGGTGTTACAACACCTAAGAAAGCTTCTGGAATCTCTGAAGTGGGAGCAGGCCGAGAAATGAACGGTACTTTAGTTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGTAGAATCGCATTTGACGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGACACAAATGGGTTCTAATGCAAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAAAAAGAGTACAAGGCTAGATTACGGGAAACAAAAGCTAAGGTTCACCATAAACATGGTCATTTTGAAGTTGATAAACTTCGTCGAAAATGGTGGGGAAAGTTCAGCTCAAAAGCATCATAA | 3711 | 41.39 | GKLEATTSTKTPPSNFFIIFPSPPPPPPPTPSSLLLLMDRGFGKMMLSASPSTIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPTSKARIPPVRRALPVNFKVNDDGSSECSINVFNGREDAIRKENGLGNFAFRRINRDQDDESPYMVASENDNRDQVNVASALLSHIQGSNWEDNISYFLQKKLRVWCQLPTGQWELGTIQSNSGTEACIMLSNKKVVKVSTVDLLPANPDIVEGVDDLVQLGYLNEPSSNAGSVLIAINPLKDTKQYGNGLIAAYRQKVMNNPHVYAIADSAYSAMMQDEVNQSIIISGESGAGKTETAKVAVQYLTAFGGGNGIDDRIPQANVILEAFGNAKTSRNNNASRFSRVVQLVNSERSFHVFYQLCAGAPSTLKEKLNIRVPSEYSYLNQSECLVIGGVDDARKFHILVEALDILQFTKEDQEHAFGLLAAVLWIGNITFQIIDSENHVEVMANEAVANAAKLMGCSPNELKLVLSTHKVQSGNDSIAKKMTLRQATYARDALAKFIYASLFDWVVEQINKSLKPRMEHSGSSINILDFFGFESFKAWFFTHLCVFSMQQYVMVIILLSPIQKNGFEQFCINYANERLQQHFSRHMFKLQQEDYELNGVDGTKVNFEDNLECLNLIEKKPHGVLALLDEELNFAKATDLTFANKLKQHLKSQPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSASIQLLSSCTCKLLQLLASKMINQSHKPTVSVGSTEIVESPEPGVGTKYKVLLFDLFHKLESTNHHFICCIRPNRNQVGGLFEEDLVLQQLRYCGILEVARISRSGYPTRMTHQEFAGRYGFLLKETSVSRDSLSISIAVLQQFNIHPEMYRVGYIKLFFRTGQIRALDERKKQVMQGILGIQKYFRGCHARGNFHDLKQGATTLQSFIRGENARRRCTVKRFSFVVYAFSVPKKVYEVQAIIRLQSVIRGSLARKHLSMRDSKRFHENKKTKLNKGRRVSEEEFQERAQSLPTSLTELQKKVVEAEATIEKKEEENAALREQVKQFESRRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLAAENAAPPGRVDACNSPPHYYDSEDTTSMGSRTPGVTTPKKASGISEVGAGREMNGTLVAVNNLVKEFEQRRIAFDDDAKALIEAKSGQTQMGSNANPDEEYRKIKVRFEAWKKEYKARLRETKAKVHHKHGHFEVDKLRRKWWGKFSSKAS | 1236 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 8550201 | 8561322 | + | MELO3C018189.2.1 | Cme04g00738 | 324999 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g00738 | 1236 | ProSiteProfiles | Myosin motor domain profile. | 255 | 894 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN | 81 | 369 | - | - | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN | 369 | 577 | - | - | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN | 593 | 1234 | - | - | |
| Cme04g00738 | 1236 | Pfam | IQ calmodulin-binding motif | 961 | 979 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | Pfam | IQ calmodulin-binding motif | 922 | 939 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | Gene3D | - | 827 | 895 | - | - | |
| Cme04g00738 | 1236 | ProSiteProfiles | IQ motif profile. | 959 | 986 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 185 | 234 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | Gene3D | - | 900 | 945 | - | - | |
| Cme04g00738 | 1236 | Gene3D | Kinesin motor domain | 742 | 826 | IPR036961 | - | |
| Cme04g00738 | 1236 | Gene3D | Kinesin motor domain | 203 | 374 | IPR036961 | - | |
| Cme04g00738 | 1236 | Pfam | Myosin head (motor domain) | 256 | 368 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | Pfam | Myosin head (motor domain) | 369 | 577 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | Pfam | Myosin head (motor domain) | 593 | 882 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 440 | 574 | - | - | |
| Cme04g00738 | 1236 | SMART | MYSc_2a | 232 | 895 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | Coils | Coil | 1017 | 1065 | - | - | |
| Cme04g00738 | 1236 | MobiDBLite | consensus disorder prediction | 1107 | 1128 | - | - | |
| Cme04g00738 | 1236 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Cme04g00738 | 1236 | CDD | MYSc_Myo8 | 254 | 882 | IPR036022 | - | |
| Cme04g00738 | 1236 | PRINTS | Myosin heavy chain signature | 349 | 376 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | PRINTS | Myosin heavy chain signature | 634 | 662 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | PRINTS | Myosin heavy chain signature | 581 | 609 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | PRINTS | Myosin heavy chain signature | 307 | 332 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | PRINTS | Myosin heavy chain signature | 253 | 272 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme04g00738 | 1236 | SMART | iq_5 | 958 | 980 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | SMART | iq_5 | 918 | 940 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | SMART | iq_5 | 895 | 917 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Cme04g00738 | 1236 | ProSiteProfiles | IQ motif profile. | 897 | 925 | IPR000048 | GO:0005515 | |
| Cme04g00738 | 1236 | MobiDBLite | consensus disorder prediction | 69 | 91 | - | - | |
| Cme04g00738 | 1236 | MobiDBLite | consensus disorder prediction | 1107 | 1124 | - | - | |
| Cme04g00738 | 1236 | Gene3D | - | 593 | 741 | - | - | |
| Cme04g00738 | 1236 | Gene3D | - | 379 | 435 | - | - | |
| Cme04g00738 | 1236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 207 | 947 | IPR027417 | - | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN-2 ISOFORM X1 | 81 | 369 | - | - | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN-2 ISOFORM X1 | 593 | 1234 | - | - | |
| Cme04g00738 | 1236 | PANTHER | MYOSIN-2 ISOFORM X1 | 369 | 577 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g00738 | Cme-Chr4:8550201 | Cme10g00784 | Cme-Chr10:5073611 | 0 | dispersed | |
| Cme04g00738 | Cme-Chr4:8550201 | Cme06g00435 | Cme-Chr6:2750439 | 4.39E-141 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g00738 | K10357 | - | csv:101210624 | 2098.94 |