Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00788 ATGGACTCTCATCAACTCTTTGGATTTGGGGTTAATAGTGCTGCTGGTCTTTCATTTACATCTCCCTGTTCCTCCGTTCCTTCTTTACCTAATACTTTGCTTGGACCCTTGAAATTCAATTTAAGTAGTTCCCCGGCTTTGTCTCCTCTATTCTCTTCGCATTTTGAATTCGATTCCTTTACGACGACGACTGTGAGTGGTAGTCCGGATCAAAGAAACTCCCCAGATAATCTCTCTGGACTTAGCCCTTCTTGTAATTCGTCCTTTGAAACCAGTAGCTTTAATCAAATAGCTTCATCGTATTTGGATCATTTTGAGGACGAGAGTCGGCAATTGCATTCGGGGTCGAATGCGTTTGTTTATGACGGATACTCCGCTGAGAACATAAGCTACACTTTGAAACAATTGGAGAGTGTTCTGATGGGGCCGGATAATGAGGAAGTTGTGAGCAAGCCTGATGTTTCGTTTGGAGTGAGTGGCAGGCCACAGATGATGGGGCAGAGGTCTTACTCATGGAGCCAAGATCGACGTGGTGGGTCCTATGGTGTTCAGTCTCAGGCGTCGCCAGTGTCAAGAAGCCAGCAATCCGAGGCAGTTCACTTGGGGAAACGACAGAAATCGATGGATGAATCATTGTTGCAGCAGCAGGGAGGATTGCCATCGGATAATTTGAAAGACTTGTTGATTGCTTGTGCAAAAGCTTTATCTGAAAACAGGATGAAGGATTTTGATAACTTGGTTGCTACAGCAAGAGGCGCCGTGTCTATTGGTGGAGAGCCAATCCAGCGTCTTGGCGCTTACATGGTGGAAGGGTTGGTGGCCAGGAAAGAGGAGTCGGGGGCAAATATATATCGAGCTCTCAACTGTAGGGAGCCTGCCAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCGAACGGGGCGATTGCCGAAGCCTGTAGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGCAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCTAGTGGGGCTCCCCATGTGAGAATAACTGGTATTGATGACCCTGTGTCTAAATATGCCCGTGGCGATGGGTTGGAGGTCGTGGAGAAGCGGTTGGCCGAAATCTCTATGAAGTATGGAATACCAGTGGAGTTTCATGGAATGCCTGTTTTTGCTCCAGACATCACGCGTGATATGCTCGACATCAGACCCGGGGAGGCTTTGGCTGTAAACTTCCCATTGCAACTTCATCATACCCCGGATGAAAGCGTGGATGTGAACAATCCACGCGACGGTCTGCTACGGATGGTGAAGTCATTATCTCCAAAGGTAGTAACTTTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTTTGGAAACTTTAGATTACTACTTAGCAATCTTCGAGTCCATTGATGTCACTCTACCAAGGAACAGCAAGAAGCGCATCAATGTTGAGCAACATTGTTTGGCCAAAGATATTGTCAATGTCATCGCCTGTGAGGGGAGGGATCGAGAAGAGCGCCATGAGCTTTTTGGCAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCCGCCAGTCCCCATTGAGCTCTTACGTCAACTCTGTCATTAGGAGTCTGCTCAAGTATTATTCGGACCATTACACGCTGGTCGAAAAGGATGGAGCTATGCTGCTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCTTGGTATTAA 1785 47.17 MDSHQLFGFGVNSAAGLSFTSPCSSVPSLPNTLLGPLKFNLSSSPALSPLFSSHFEFDSFTTTTVSGSPDQRNSPDNLSGLSPSCNSSFETSSFNQIASSYLDHFEDESRQLHSGSNAFVYDGYSAENISYTLKQLESVLMGPDNEEVVSKPDVSFGVSGRPQMMGQRSYSWSQDRRGGSYGVQSQASPVSRSQQSEAVHLGKRQKSMDESLLQQQGGLPSDNLKDLLIACAKALSENRMKDFDNLVATARGAVSIGGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVEKRLAEISMKYGIPVEFHGMPVFAPDITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFLETLDYYLAIFESIDVTLPRNSKKRINVEQHCLAKDIVNVIACEGRDREERHELFGKWKSRLTMAGFRQSPLSSYVNSVIRSLLKYYSDHYTLVEKDGAMLLGWKNRNLISASAWY 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9540036 9542595 - MELO3C018144.2.1 Cme04g00788 325049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00788 594 ProSiteProfiles GRAS family profile. 215 594 IPR005202 -
Cme04g00788 594 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 20 593 - -
Cme04g00788 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 593 IPR005202 -
Cme04g00788 594 Pfam GRAS domain family 224 593 IPR005202 -
Cme04g00788 594 MobiDBLite consensus disorder prediction 154 209 - -
Cme04g00788 594 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00788 Cme-Chr4:9540036 Cme11g00929 Cme-Chr11:12896452 1.12E-175 dispersed
Cme08g00842 Cme-Chr8:5556885 Cme04g00788 Cme-Chr4:9540036 3.20E-56 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41167 PF03514 GRAS 3.80E-127 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00788 - - csv:101216606 1129.39