Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00792 ATGCCAACAGTTTGGTTTTCTTTGAAAAAGTCTTTCCCTTGCAAACCAGAGCCATCTGAAGTTTATGATCCAAAGAACAGGAAACAACTCAACACAATCACAACTAAGAAAGCATCCAGAAAGTCAGGATGTTCTTCTGGAAGGTCTGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGGCACATGGAAAAACCACCGATATGCAGCCCCAGGTCGATCGGTAGCAGTGAGTTCCTCAACCCAATTGCTCATGAAGTCATACTAAGCAACTCCAAGTGTGAGCTCAAGATCACTGGTTTTGGAAGCTTCCCCCAAGAGGGTGTGGGAAGTGCTGGCTTTGGCGGGGGTGGGGGTGGGAATTCGCCATTTTTCGGTACACTAAGACCCGGAACTCCTGGTCCTGAGGAGCACTTTGTTAACAACTCCAATTCTCCTTTTAATAACACTTCCATGTCTGCTGCAAGAAAGGTTCCTTCTCTTTTATCATATAGAAATGGGTCTGCAGCTGGGAGTACTGCTAAATCTAAGGTGAGTGGGGAAGTTCATCCAAGCAAAAGATTCTCCCCGCTAACTGAATTAAACGGTAATACGTTTTCGACAGTTACTTGCCACAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCTAAGCATGCTGTTACTGAGCTTGTGGAAGGTGATTCATCAAGAAAAATTGTCGAAATAATATGTCGAACGAACTTGTTGAAATCGGAGAACAATGGCAACCGAATCGAACGAGTCTTCAAAGTTCACAATATGCAAAAAACATTAGCTGGATTTGAAGAATACAGAGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCGAAGAAACACCCTCGTTGTCTTGCCGATGGTAACGAGCTGCTGAGGTTTTATGGAACTACTCTAGCCTGCTCTCTTGGACTAAATGGCTCCTCTAGCCTCTGCATATCACAGAAATGCAGTGTCTGCAGAATCATAAGGAATGGTTTCTCAGCCAAGAAGGATATGAAAGAAGAAGTAGGAGTTTTCACGACTTCGACGAGCGGAAAAGCTTTCGAAACCATTGAAACGACAGAAGAAAGCTCGTTGAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCTTTGGAAAATATACAAGATGTGGTTGGCCAAGCAGGGTTTGATTCTTTAGCAGGCAAAGTGGGATTACATTCCAATATTGAAGAGCTTTATTTGCTTAGCCCTAGAGCTTTGCTTCCTTGTTTTGTTGTAATTTGCAAACCATGA 1326 43.51 MPTVWFSLKKSFPCKPEPSEVYDPKNRKQLNTITTKKASRKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFPQEGVGSAGFGGGGGGNSPFFGTLRPGTPGPEEHFVNNSNSPFNNTSMSAARKVPSLLSYRNGSAAGSTAKSKVSGEVHPSKRFSPLTELNGNTFSTVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIERVFKVHNMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFYGTTLACSLGLNGSSSLCISQKCSVCRIIRNGFSAKKDMKEEVGVFTTSTSGKAFETIETTEESSLKKALIICRVIAGRVHRPLENIQDVVGQAGFDSLAGKVGLHSNIEELYLLSPRALLPCFVVICKP 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9675644 9677476 - MELO3C018138.2.1 Cme04g00792 325053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00792 441 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Cme04g00792 441 SUPERFAMILY ADP-ribosylation 233 440 - -
Cme04g00792 441 PANTHER - 2 441 - -
Cme04g00792 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 441 - -
Cme04g00792 441 Gene3D - 238 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00792 Cme-Chr4:9675644 Cme09g00823 Cme-Chr9:10602865 1.51E-69 dispersed
Cme08g00365 Cme-Chr8:2287702 Cme04g00792 Cme-Chr4:9675644 6.75E-07 transposed
Cme04g00792 Cme-Chr4:9675644 Cme06g02044 Cme-Chr6:25731769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00792 - - csv:101213316 810.061