Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00837 ATGCGATGTTTGATTCCCACACCCTTTTTGCTAATTTTTGTGCTTCTCTCCAATCTCCAGCTCTGTTTTTCACAAGATTACATTATTGGTGGTGGTGCTGGTGATGGTGCTGGTGACTCTCCGCCCGAGGCAGGGGCGCCACCGGAGCAAAATGAATGTAATGGTATATTCTTAACGTACACATTCTTTTCAAGGGAAAAAGAATTTCCTCATGTGAAGAATGCTTCTGCTCAGGCTTGGGCGTTCAGAGCTCAGGCGACGTTGTTGAACGCCGGCACCACGGAGCTGGAGGGTTGGAAGATGTATATTGGGTTTCAACATAGAGAGATTTTAGTGTCGGCGAGTGGGGCAGTGTTGGTGGACGGTTCGGATTTTCCGGCGGATGTGGGGAAAGGGGTGATCTTGGCTGGGTACACACAAACGGACTTGAAAACGGCGATAGAAACGGCCGGAGATTATAACCAAATGCAGGTGACGATTGATATCACGGGAACACAATTCGGCGTGAAGAAGAATGGAATTCCGATGCCGAAAACGATTCGCCTTGAAAACGAAGGGTTTAAGTGTCGGCAGCCACGCCGTCGTCGCAACAAAAGCTATATGCATGTTTGCTGCAAGAAAGACCCCAAATTCAAGGAAAAACCACCAAAGAAGACTAAGTTTTTGCCAAGACAAAACGGCCATCTCTCCCTCACCTATGACGTCCTCCAAGCTTACGGCAACAACTATCTCGCACAAGTCACCATTGACAACAACCACCCTCTCGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTATACCCACAAAATTGATTCCTCCGACTGCATCTTTGGCCCTCAAGGCCAATACTATCAAGATTTTGACTTCTCCCAAGTCATGAATTGTGAGAAACATCCCATCATTGCCGACCTTCCTTCCGATCGAGCCAACGATTCCAAGGTTGGGAAGTTACCCTTCTGCTGCAAGAATGGCACGATCTTACCGTCATTGATGGATCAAAGCAAAGCAAGGTCTATTTTTCAGCTCCAAGTCTATAAACTTCCTCCTGACTTCAATAGAACTGCCTTGTACCCTCCTCAGAAATGGAAGATTAATGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCTATTAGAGTTGAACCAACAGAATTTCCTGACTCGTCTGGACTTCAAGCCATAACCACAGCCATTGCTAGTTGGCAAGTGGTTTGCAACATTACAACTCCAAAACCTAAACAATCAAAATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGCTATCCCTTGCAATACTTGTGCTTGTGGATGTGATGAACCTCAAACTTGCAACCCAAATTCTTCTCCATTGCTTCTTCCACCAGAAGCCCTTTTAGTTCCATTTGACAATAGAACTATAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTACCAATCCCAAAGAAGCTCCCTTGTCCTGATAATTGTGGAGTTAGTTTAAATTGGCATATAAACTCAGATTATACCAGTGGTTGGACTGCTAGAATCACTCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTGTACTCTTTCAATGGGACTAAACTCCCACCAGAAATGATCAAGAACACCATCTTGTTTCAAGGATTGGAAGGTTTGAATTACCTGATGGGGGAGACGAATGGAACGGACCCAAAATTCGATCCGAGAGTACCGGGAAAGCAACAATCAGTGATTTCGTTCACTAAGAAGAATATGAGGAACCTGATCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTATATTTCAATGGAGAAGAGTGTGCACTTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCACATAGCCTTCATGTCAGCTCTGAACCTTTAATGCTGCTGTTTACGGTTGTGGCCTTTTTCATTCTCTTCATTGATGGCTTTCATTGA 2031 44.26 MRCLIPTPFLLIFVLLSNLQLCFSQDYIIGGGAGDGAGDSPPEAGAPPEQNECNGIFLTYTFFSREKEFPHVKNASAQAWAFRAQATLLNAGTTELEGWKMYIGFQHREILVSASGAVLVDGSDFPADVGKGVILAGYTQTDLKTAIETAGDYNQMQVTIDITGTQFGVKKNGIPMPKTIRLENEGFKCRQPRRRRNKSYMHVCCKKDPKFKEKPPKKTKFLPRQNGHLSLTYDVLQAYGNNYLAQVTIDNNHPLGRLDHWNLTWEWMRGEFISTMRGAYTHKIDSSDCIFGPQGQYYQDFDFSQVMNCEKHPIIADLPSDRANDSKVGKLPFCCKNGTILPSLMDQSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVEPTEFPDSSGLQAITTAIASWQVVCNITTPKPKQSKCCVSFSAYYNDSAIPCNTCACGCDEPQTCNPNSSPLLLPPEALLVPFDNRTIKAKAWAKIKHLPIPKKLPCPDNCGVSLNWHINSDYTSGWTARITLFNWEEYPFEDWFAAVQLDKAAKGYENVYSFNGTKLPPEMIKNTILFQGLEGLNYLMGETNGTDPKFDPRVPGKQQSVISFTKKNMRNLINIKEGDGFPSKVYFNGEECALPPHIPLGNGAAHSLHVSSEPLMLLFTVVAFFILFIDGFH 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10529127 10533185 - MELO3C018094.2.1 Cme04g00837 325098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00837 676 Pfam COBRA-like protein 243 422 IPR006918 GO:0010215|GO:0031225
Cme04g00837 676 PANTHER COBRA-LIKE PROTEIN 7 10 669 - -
Cme04g00837 676 PANTHER COBRA-LIKE PROTEIN 10 10 669 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00837 Cme-Chr4:10529127 Cme06g02279 Cme-Chr6:29983882 0 dispersed
Cme04g00837 Cme-Chr4:10529127 Cme02g01812 Cme-Chr2:24896065 1.59E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00837 - - csv:101216608 984.556