Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00848 ATGGCAACCAAATCTTCTCCTCATTTTCATAGTTCAAAATTCAAATACAAATACAAATCCCCCAAACCCAAACCCAAGCCCCATTATAAATTCTTCGCATGGTTACCTATTTCTGAGCTCAGCTCCCCTACTGACCCCATCACTCCTAAACAATACTTTTGTTGGATTTCTACCATGATCTGTGCTGTGAAACAATGCTCTAGGGCTATCCATTGCTCTGATGGTGCTATTCGGAGCAAAACATCGGTTCCTTCTCGAGGATCCTCGTTTCTTCCACCTCTTCCGGTGCAAAAACCTCGAAACTCCGCTATTTCTGTTCATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGAACACTTGGTGTTCGTAAAGCGAATCTGATCAAATGCGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGCAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTATAATAAGAAGGTGTTGAATGCTTACCCATATCCATGGTTGACCTCGACTCTGTCGCTTGCCGCCGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAAGCTCCCAAAACCGATGTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGTATGTCAAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTATTGGTTTCGAGGTTCTTGCTGGGTGAGACCTTCCCGCTTCCTGTCTACTTGTCGCTCCTCCCGATCATCGGTGGTTGTGCTCTCGCGGCTGTGACCGAACTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCAAAGAGGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCGATTTTGTCTCTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGACCACAATTGTGGGCTGCTGGATGGCAAACAGCCGTTTCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCTGCGCAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACGTTTAGCATTGGAAACACCATGAAACGAATATCAGTCATAGTTTCTTCCATCATCATCTTCCGCACGCCAGTGCAGCCAGTCAACGCTCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCGCAGGCAAAGCAATGA 1365 45.49 MATKSSPHFHSSKFKYKYKSPKPKPKPHYKFFAWLPISELSSPTDPITPKQYFCWISTMICAVKQCSRAIHCSDGAIRSKTSVPSRGSSFLPPLPVQKPRNSAISVHKAVHVSSLENFGTLGVRKANLIKCEAYEAERSQPIESSIELPQSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDVEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPQLWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10777167 10781302 + MELO3C018083.2.1 Cme04g00848 325109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00848 454 MobiDBLite consensus disorder prediction 1 24 - -
Cme04g00848 454 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 74 454 - -
Cme04g00848 454 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 162 453 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cme04g00848 454 Pfam Triose-phosphate Transporter family 162 450 IPR004853 -
Cme04g00848 454 MobiDBLite consensus disorder prediction 10 24 - -
Cme04g00848 454 SUPERFAMILY Multidrug resistance efflux transporter EmrE 204 297 - -
Cme04g00848 454 PANTHER SOLUTE CARRIER FAMILY 35 74 454 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g00848 Cme06g02272 CCT
Cme04g00848 Cme06g02272 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00848 Cme-Chr4:10777167 Cme06g02272 Cme-Chr6:29779107 0 dispersed
Cme04g00848 Cme-Chr4:10777167 Cme12g01691 Cme-Chr12:23801716 1.24E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00848 K15283 - csv:101220046 739.954