Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00927 ATGCCTTTCTCGATTTTGCTACCTCTTTTTGTTCTTCATGCCTTCGATTTGCTTTTCTCTTGCTCAGGACAATCGTCTGTTTCACCACATATATACTTATCTCCTTCCTTACAGCCAAGCCTGCAAACAATGACCCCAGGGATGTCAACAGAGCATGAAAGGTTGGAGTCCATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGATAACTGGATATCTAAGTCTTTATTGGGACCATCTACTTCTCCAGCACCCTCTCCAGGTCCCAGCAGTGCACCCTTGCCTGTCCGACGTCATCGACGTCATCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAATGAGCTTGAAAGTGAGATTGCAGTGGGGACTTACTTAGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGGGAGAAGTTTGATAATACAACTGCAGTACTTACTTACAGGAGGTTTTGGGATAAAAAAGTACATTTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCGGGGATTCCTTCTTCACCGCCATATGGGGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCTATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTTTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCGTCTAGTGCTGTTGGCCCGGTCTTCACACCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCGAGTAGCATTGCAAGCTCCACCTCTGTTTCACTAATGTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGAATTTTAGGTGAAGGGGGGTTTGGCCGAGTTTACTGTGGTATTTTGGACGATGGAAATGAAGTTGCAGTTAAGTTGCTTACACGGGATAATCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGCATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAATGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGGGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCTCGTGTAATTCACCGCGATTTTAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCAAGGGAAGCAACTGAAGGAAGTGAACACATCTCAACACGGGTGATGGGAACTTTCGGATACGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGCGATGTTTATAGTTATGGAGTCGTGCTACTTGAACTTCTTTCTGGACGAAAACCAGTAGACATGTCCCAACCACATGGTGAGGAGAATCTCGTAACGTGGGCACGGCCTCTATTGACTAGTAGAGAAGGTTTGGAGCAACTAGTAGATCCTTCTTTAGCTGGTACCTACGACTTCGATGACATGGCCAAAGTAGCTGCCATTGCTTCGATGTGTGTTCATCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAAGCTCTAAAACTGATATACAATGACACAGACGAGACATGTGCAGATTACTGCAGTCAAAAGGAGTCCTCGGCTCGGGACTCAGATTTTAAAGGCGACCTTGTCCCATCTGACAGCAGTTGGTGGAATGCCGGTGGCCTTACACCTCGACTCACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATATAGCTCTGGGCCTCTTGAAGAAATGGAAAACCGTCCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCTATTCGACATGGAAACAGGTCAGGTCCATTACGAACTGCTCGAAGTAAGCCTTCATTCTATAGATTTTCGGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGACCTTCTTGGAACAGCAACAGGTTTTGGGTTTGA 2328 44.37 MPFSILLPLFVLHAFDLLFSCSGQSSVSPHIYLSPSLQPSLQTMTPGMSTEHERLESISFSFVPSKLRDNWISKSLLGPSTSPAPSPGPSSAPLPVRRHRRHRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTPSINKRSGLGSALSSSIASSTSVSLMSTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILDDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRNGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPSFYRFSGSRSEHGGFLSRPSWNSNRFWV 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12444515 12450945 - MELO3C012822.2.1 Cme04g00927 325188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00927 775 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672|GO:0006468
Cme04g00927 775 CDD STKc_IRAK 377 646 - -
Cme04g00927 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Cme04g00927 775 SUPERFAMILY Protein kinase-like (PK-like) 355 650 IPR011009 -
Cme04g00927 775 MobiDBLite consensus disorder prediction 78 115 - -
Cme04g00927 775 PANTHER OS01G0750732 PROTEIN 50 771 - -
Cme04g00927 775 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Cme04g00927 775 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g00927 775 Gene3D Transferase(Phosphotransferase) domain 1 447 670 - -
Cme04g00927 775 Gene3D Phosphorylase Kinase; domain 1 342 446 - -
Cme04g00927 775 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 50 771 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02844 Cme-Chr1:35340014 Cme04g00927 Cme-Chr4:12444515 0 dispersed
Cme02g00113 Cme-Chr2:849433 Cme04g00927 Cme-Chr4:12444515 1.46E-102 dispersed
Cme04g00927 Cme-Chr4:12444515 Cme07g02090 Cme-Chr7:25650633 5.72E-125 dispersed
Cme06g01335 Cme-Chr6:11283147 Cme04g00927 Cme-Chr4:12444515 4.79E-60 dispersed
Cme11g00187 Cme-Chr11:2262590 Cme04g00927 Cme-Chr4:12444515 5.39E-97 dispersed
Cme04g00927 Cme-Chr4:12444515 Cme02g00246 Cme-Chr2:2012503 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64801 PF07714 PK_Tyr_Ser-Thr 3.70E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00927 - - csv:101203278 1434.47