Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00944 ATGGATTTCAATACCCGTATGGGTTTTCTTCTTTTTCTCTATTTTCTTTCACTTCTTGTTCAACCAAACACTTCCACTCTTCAAACTTACATCATTCAACTCCACCCGCATGGTTTAATCACCTCTGTTTTTGATTCTAAGCTTCAATGGCACCTTTCTTTTCTTGAACAAACTCTTTCTGCCGAAGAAGACTCTTCTTCTCGCTTGCTTTACTCTTATTCTAATGCTATGGAAGGTTTTGCAGCTCAGTTAACTGAAACTGAGCTTGAGTATTTAAAGAAGTTGCCTGATGTTGTAGCTGTTAGAGAAGATAGAAAGTATCAAATTCAGACGACTTACTCTCATAAGTTCTTGGGGCTTAGTGTTGGCACACAAGGTGTCTGGCAAAAGTCCTCAATGGGCCAAGGGGCAATAGTTGGGCTTCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAAAATGCCCCCAATTCCACAAAAATGGCGAGGGGCTTGCCAAGAAGGGCAAGATTTTAATTCCTCTAATTGTAACAGGAAACTCATTGGTGCTAAGTTCTTTATCAAAGGACATCATGTGGCTTCGTCGCTGCCTTCCGATGTTGTCCAGGAGTATGTCTCCCCAAGAGACTCTCATGGTCATGGGACTCACACGTCTTCTACAGCTGCGGGTGCTTCCGTTGCTGATGCTAGCGTGTTCGGTAATGGAGCTGGTGTGGCGCAAGGGATGGCCCCAGGAGCCCACATTGCGGTGTACAAGGTTTGTTGGTTTAGTGGCTGTTATAGCTCGGATATTGTAGCAGCCATGGATTCTGCTATAAGCGATGGTGTTGACATTCTCTCCCTTTCACTTGGTGGCTTCCCGCTTCCGTTTTTCGATGATAGTATTGCCATTGGAAGTTTTCGGGCAATGCAGCATGGGATCTCAGTTGTCTGTGCAGCAGGAAACAATGGTCCAACTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAGGCACACTTGACCGAAGATTTCCAGCTATTGTTCGACTAAGCAATGGAGAAGCCATTTACGGCGAATCAATGTACCCTGGAAACAAGTTCAAGCAAGCTACCAAGGAGCTTGAAGTGGTTTATTTGACTGGAGGGCAAATGGGAGGTGAGCTTTGCTTAAAAGGGTCTCTTCCGAGAGAAAAAGTACAAGGCAAAATGGTGGTTTGCGACCGTGGTGTCAACGGCAGATCGGAAAAGGGGCAAATTGTGAAGGAATCTGGAGGTGCTGCTATGATCCTTGCAAATTCAGAGATAAACCTAGAGGAAGACTTGGTTGATGTTCATGTTTTGCCCGCCACTTTGATTGGATTTGCAGAAGCAAATCGCTTAAAAGCTTACATTAACACCACAACCAATCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATTGGAAGATCAAGAGCTCCTTCAGTAGCTCAGTTTTCATCAAGGGGTCCAAGCCTCTCAAATCCTTCAACTCTCAAACCTGATGTAATTGCTCCTGGTGTTAACATTATAGCAGCTTGGCCTCAAAATCTTGGTCCAACTAGCCTTCCAGAAGATTCTAGAAGATCAAACTTCACTGTCATGTCAGGAACTTCCATGGCTTGTCCCCATGTCAGTGGAATTACAGCTCTAATCCATTCAGCTCATCCAAAATGGACACCTGCAGCTATCAAATCAGCCATTATGACAACTGCTGATGTTACTGATCATTTTGGTAAGCAAATTCTTGATGGCAACAAACCAGCTGATGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAAAGCAATTGATCCTGGTCTAGTCTATGATATCAAACCATATGAATATATCATTCATCTTTGTGCTCTTGGATATACTCATTCAGAAATCTTCATTATCACCCACATGAATGTTAGTTGCCACAAAGTTTTGCAGATGAACAAAGGCTTCACCTTGAATTATCCTTCCATGTCTGTCATTTTTAAGCATGGAACGACGAGTAAGATGGTTTCAAGACGGTTGACGAATGTTGGGAGCACAAATTCAATCTATGAAGTGAAAGTTACTGCACCTGAAGGAGTAAGAGTTCGAGTTAAGCCACGGCGCTTGGTGTTCAAACACGTGAATCAAAGCTTGAATTATAAGGTATGGTTTATGTCTGAAAAGGGAAAGGAAGGAAGAAAAGTGAGGTTTACAGAAGGGGATTTGACATGGATTCATTGTGAGAATAGCAAATACAAAGTTAGAAGCCCAATTGTAGTGACTTGGAAGAACTAA 2307 43.22 MDFNTRMGFLLFLYFLSLLVQPNTSTLQTYIIQLHPHGLITSVFDSKLQWHLSFLEQTLSAEEDSSSRLLYSYSNAMEGFAAQLTETELEYLKKLPDVVAVREDRKYQIQTTYSHKFLGLSVGTQGVWQKSSMGQGAIVGLLDTGVWPESPSFSDSKMPPIPQKWRGACQEGQDFNSSNCNRKLIGAKFFIKGHHVASSLPSDVVQEYVSPRDSHGHGTHTSSTAAGASVADASVFGNGAGVAQGMAPGAHIAVYKVCWFSGCYSSDIVAAMDSAISDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVVCAAGNNGPTQSSVANVAPWITTIGAGTLDRRFPAIVRLSNGEAIYGESMYPGNKFKQATKELEVVYLTGGQMGGELCLKGSLPREKVQGKMVVCDRGVNGRSEKGQIVKESGGAAMILANSEINLEEDLVDVHVLPATLIGFAEANRLKAYINTTTNPKARIQFGGTVIGRSRAPSVAQFSSRGPSLSNPSTLKPDVIAPGVNIIAAWPQNLGPTSLPEDSRRSNFTVMSGTSMACPHVSGITALIHSAHPKWTPAAIKSAIMTTADVTDHFGKQILDGNKPADVFAMGAGHVNPTKAIDPGLVYDIKPYEYIIHLCALGYTHSEIFIITHMNVSCHKVLQMNKGFTLNYPSMSVIFKHGTTSKMVSRRLTNVGSTNSIYEVKVTAPEGVRVRVKPRRLVFKHVNQSLNYKVWFMSEKGKEGRKVRFTEGDLTWIHCENSKYKVRSPIVVTWKN 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12697460 12699964 - MELO3C012837.2.1 Cme04g00944 325205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00944 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 765 IPR045051 -
Cme04g00944 768 CDD PA_subtilisin_like 350 476 - -
Cme04g00944 768 ProSiteProfiles Serine proteases, subtilase domain profile. 112 613 - -
Cme04g00944 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Cme04g00944 768 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cme04g00944 768 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cme04g00944 768 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Cme04g00944 768 SUPERFAMILY Subtilisin-like 110 617 IPR036852 GO:0004252|GO:0006508
Cme04g00944 768 Pfam Fibronectin type-III domain 662 764 IPR041469 -
Cme04g00944 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 24 765 - -
Cme04g00944 768 CDD Peptidases_S8_3 107 581 IPR034197 -
Cme04g00944 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Cme04g00944 768 Gene3D - 630 766 - -
Cme04g00944 768 Gene3D - 343 483 - -
Cme04g00944 768 Pfam Subtilase family 134 588 IPR000209 GO:0006508|GO:0008236
Cme04g00944 768 Pfam PA domain 397 462 IPR003137 -
Cme04g00944 768 Gene3D Peptidase S8/S53 domain 137 626 IPR036852 GO:0004252|GO:0006508
Cme04g00944 768 SUPERFAMILY Protease propeptides/inhibitors 52 109 - -
Cme04g00944 768 Pfam Peptidase inhibitor I9 29 109 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00944 Cme-Chr4:12697460 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme04g00944 Cme-Chr4:12697460 Cme02g00307 Cme-Chr2:2555800 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00944 - - csv:101222839 1511.89