Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00976 ATGGGGAATGACCAATTACAAGTATTAAATGCACTTGACGTAGCTAAAACACAATGGTATCACTTTACAGCAATCATCATCGCTGGAATGGGATTCTTCACTGATGCATATGATCTATTTTGTATTTCTCTTGTAACCAAATTACTTGGAAGAATATATTATCATGTTGATGGTGCATTAAAGCCAGGGACATTGCCTCCAAATGTTGCTGCTGCTGTTAATGGCGTGGCATTTGTTGGAACATTAGCAGGACAACTCTTCTTTGGTTGGTTGGGTGACAAAATGGGAAGAAAAAGGGTTTATGGCATGACTCTAATGCTTATGGTTATATGTTCTATAGGCTCAGGACTTTCTTTTGGCCACAATTCTCATTCTGTCATGACTACGCTTTGCTTCTTTCGGTTCTGGCTCGGTTTCGGTATTGGTGGTGATTATCCTCTTTCGGCAACGATCATGTCGGAGTATTCTAATAAGAAGACCCGTGGTGCATTCGTTGCTGCAGTTTTTGCTATGCAGGGGTTTGGAATTTTGGGTGGAGGTATGTTTGCTATTATCATATCTTTGGGATTTAAGGCTAAGTTTGATGCTCCACCTTACGAAGTTGATCCAATTAAATCAACTGTGCCACAAGCTGATTTTATTTGGAGGATAGTTCTAATGGTTGGAGCTCTGCCTGCTGCTCTTACTTACTATTGGAGAATGAAAATGCCTGAAACAGCACGATACACGGCTCTTGTCGCGAAAGATACAACTCAAGCTGCATCAGATATGTCTAAAGTTTTGCAAATGGAGATTGAGGCAGAAGCACAAAAGCCTGCTGCTCAAACTCCAAAGGAAAATGCGAGCCCAAGTGCATATGGCTTGTTCTCTAAAGAGTTTTTGCATCGCCATGGAACTCATTTACTTGGAACTACTAGTACTTGGTTTTTACTTGATATTGCATTCTACAGTCAAAACTTGTTTCAAAAAGATATCTTTAGTGCAATTGGATGGATTCCTCCAGCAGCCACTATGAATGCAATTGAAGAAGTTTTTAGAATAGCCAGAGCTCAAACACTCATTGCTCTCTGTAGTACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGACAAAATGGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACCGTCTTCATGTTTGCTTTAGCCATTCCCTACCATCATTGGACTCTAAAAGACAACCGAATTGGCTTCGTGGTCCTCTACTCACTAACGTTCTTCTTTGCAAATTTTGGACCGAACGCAACAACTTTCGTCGTCCCAGCTGAAATCTTTCCAGCACGATTTCGTTCTACTTGTCACGGTATATCATCGGCATCCGGGAAGCTTGGAGCTATGGTGGGTGCATTTGGCTTTCTATATTTGGCTCAAAACCCGGACAAGAACAAAACAGATGCAGGATATCCTCCTGGCATTGGTGTCAAGAACTCGCTTCTATTGTTGGGTGGACTTAACTTTTTGGGAATTTTGTTTACTTTTCTTGTGCCTGAAGCTAAGGGAAAATCATTGGAAGAAATGTCCGGTGAGAATGAAGATGGAACCATTGGGGAAATGGGGGGTCAAACATCTTCTAGTGCTACAGTTTCACATGTTTAA 1629 41.44 MGNDQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGALKPGTLPPNVAAAVNGVAFVGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSHSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFVAAVFAMQGFGILGGGMFAIIISLGFKAKFDAPPYEVDPIKSTVPQADFIWRIVLMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMEIEAEAQKPAAQTPKENASPSAYGLFSKEFLHRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNPDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTIGEMGGQTSSSATVSHV 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13173820 13175448 - MELO3C012861.2.1 Cme04g00976 325237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00976 542 CDD MFS_PhT 25 510 - -
Cme04g00976 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 511 IPR020846 GO:0022857
Cme04g00976 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 525 - -
Cme04g00976 542 TIGRFAM 2A0109: phosphate:H+ symporter 11 520 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cme04g00976 542 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Cme04g00976 542 MobiDBLite consensus disorder prediction 515 542 - -
Cme04g00976 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 525 - -
Cme04g00976 542 Pfam Sugar (and other) transporter 26 518 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cme04g00976 542 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Cme04g00976 542 Gene3D MFS general substrate transporter like domains 272 534 IPR036259 -
Cme04g00976 542 MobiDBLite consensus disorder prediction 527 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00976 Cme-Chr4:13173820 Cme06g00498 Cme-Chr6:3137502 0 dispersed
Cme03g00725 Cme-Chr3:13193358 Cme04g00976 Cme-Chr4:13173820 0 transposed
Cme04g01022 Cme-Chr4:13916504 Cme04g00976 Cme-Chr4:13173820 1.46E-08 transposed
Cme04g00976 Cme-Chr4:13173820 Cme05g00564 Cme-Chr5:5659701 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00976 K08176 - zju:107405539 910.212