Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01040 ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCACCTACCGAGCTCTCATCCTCGGTTCGAAGCAACGGTAGAATCTCAATGAGGAAATCCGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCAGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCAAGAAATGGAGTCAACTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTTAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCCGGAGGACCACTTGGAGAGATTACCGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA 798 47.74 MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14294453 14295495 + MELO3C012912.2.1 Cme04g01040 325301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01040 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cme04g01040 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cme04g01040 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cme04g01040 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Cme04g01040 265 MobiDBLite consensus disorder prediction 28 47 - -
Cme04g01040 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01040 Cme-Chr4:14294453 Cme08g00161 Cme-Chr8:1126903 3.70E-170 dispersed
Cme04g01040 Cme-Chr4:14294453 Cme08g00160 Cme-Chr8:1124451 2.35E-170 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01040 K08912 - csv:101203342 533.872