Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01046 ATGGAGGAAACTTTTGTTCCTCTTCGTGGAATCAAGAATGACTTGAAAGGGAGATTAGTGTGTTACAAACAAGACTGGACTGGTGGTTTGAGAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTACTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCATTCTATTGTTGGAGGTCAACCTTTGCTCATCTTGGGAGTGGCAGAGCCTACTGTTATTATGTATACCTTCATGTTTAATTTTGCGAAAGAACGACCTGAGTTAGGCAGGAATTTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATCTTAGGAGCTTGTTCCATCATCAATAGGTTCACACGTCTGGCTGGTGAACTGTTTGGTTTGCTTATCGCGATGCTTTTCATGCAGCAAGCGATCAAAGGACTTGTGGATGAGTTTCGCATCCCTGAACGAGAGAATCCAAAACTGATCGAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTATCATTTGGCCTTCTACTCACTGCTTTAAGGAGCCGCAAAGCACGGTCATGGCGATATGGATCTGGTTGGCTCAGAAGCTTGATAGCAGACTATGGAGTACCGCTCATGGTTCTCGTTTGGACAGGTATTTCTTATATACCTTCAAAAAATGTTCCACAAGGAATCCCAAGGCGCCTCTTCAGCCCCAATCCATGGTCTCCTGGTGCGTACGAGAATTGGACTGTTATTAAGGATATGCTTGACGTTCCAGTTATTTATATATGTGGAGCTTTCATCCCGGCTACAATGATTGCAGTGCTTTACTATTTCGACCATAGTGTTGCATCCCAACTTGCTCAGCAGAAAGAGTTTAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTTGGAATCCCTCCATCCAATGGAGTTATCCCCCAATCTCCAATGCATACAAAGAGCCTGGCCACTCTCAAACATCAGTTGCTGCGGAATAAACTTGTAGAAACGGCACGGAGTAGTATGAGAAAGAATGCTAGCTTAGGACAGTTGTATGGAAGTATGCAACAAGCATATCAACAAATGCAGACCCCCTTGATCTACCAACAGCCTTCACTTCGTGGATTGAATGAGCTAAAAGAGACAACCATTCAAGCAGCTTCTAGTATGGGCAGTTTTGATGCTCCAGTCGATGAGACAATGTTTGATATTGAAAAGGAAATTGATGATCTATTGCCTGTTGAGGTGAAAGAACAGCGGGTCAGTAATTTGCTTCAAGCTGCAATGGTGGGAGGATGTGTTGCAGCCATGCCGGTCCTGAAGAAGATCCCGACCTCGGTTCTATGGGGTTACTTTGCTTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTTACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCATGCAACTTTCGTCGAAACCGTGCCATTCAAATCCATTGTACTTTTTACCATTTTTCAAACAGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATTGCTGGGGTGATGTTTCCTCTGATGATCATGCTCCTCGTCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGGGCGCATCTTCAAGACCTTGATGCTGCCGAATATGAAGAAGCGCCGGCTTTACCGTTCAATCTTGCGACGGAAGCCGAGCTGGGAGCAGGAGCATCTTTCGGTGGGGATGGAGAGATCTTAGATGAGGTTATCACCCGAAGCCGTGGAGAGTTTAGGCGTATTAGTAGTCCTAAAATCACAAGCTCCACAGCAACACCAATATCTGACAGAAAAAGTATAGACAGCCCTCATCGCTCTTTCAGCCCTCGGTTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCCGGTGGACGAGGGACACCGGGTCAGAGGAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACACAGCATCAAAGTAG 2154 44.89 MEETFVPLRGIKNDLKGRLVCYKQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVDEFRIPERENPKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSKNVPQGIPRRLFSPNPWSPGAYENWTVIKDMLDVPVIYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQQAYQQMQTPLIYQQPSLRGLNELKETTIQAASSMGSFDAPVDETMFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIVLFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRRISSPKITSSTATPISDRKSIDSPHRSFSPRLSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNNTASK 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14351771 14356094 - MELO3C012917.2.1 Cme04g01046 325307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01046 717 Gene3D Helical hairpin bin 18 60 - -
Cme04g01046 717 MobiDBLite consensus disorder prediction 698 717 - -
Cme04g01046 717 PANTHER ANION EXCHANGE PROTEIN 1 699 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cme04g01046 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cme04g01046 717 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cme04g01046 717 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Cme04g01046 717 PANTHER BORON TRANSPORTER 2-RELATED 1 699 - -
Cme04g01046 717 MobiDBLite consensus disorder prediction 664 686 - -
Cme04g01046 717 MobiDBLite consensus disorder prediction 648 663 - -
Cme04g01046 717 MobiDBLite consensus disorder prediction 648 717 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01046 Cme-Chr4:14351771 Cme12g01692 Cme-Chr12:23807349 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01046 K24194 - csv:101205388 1405.19