Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01067 ATGGAGATTCTAAGGACTCCATTTAGGGGTATTGTCGATGATATTAGAGGAAGAGCCGCCTGTTATAAACAAGATTGGATTGATGGTCGAATTTCAGGAATTGGAATTTTGGCCCCAACTGCTTATATCTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTTGGTGAGCAATTGAGCCGATATACAGATGGAAGATTGAGCACAGTAGAAACATTGGCTTCCACTGCCATTTGTGGTATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTGGGGGTTGCAGAACCAACAATTATTATGTATACCTATTTGTACAATTTTTGCAAGGAAAGGGAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGCCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCTAGGCTTATCAACAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCTGAGACTGAGAATACAAGTTTAGAGAATTATCAATTTCATTGGGTTTACACAAATGGATTACTGGGAATCATTTTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTGTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCGTTTGGAGTACCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCGCTGAACCATTGGACCGTTGTCAAGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCACAGTGTTGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAACCCTTCTGCTTACCACTATGACATCCTGTTGCTGGGATTTATGACATTGCTTTGTGGGTTGATCGGGCTTCCTCCTTCAAATGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGCCTTGCAACTCTCAGAAGGCGTTTGATGCGAAGAAAGATGCTAAGAAGTGCAAAGGAAAGCATAGAAAGAAAAGCTAGTGATTCCGAAATCTATGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAAAGCAACCCAATAACGACAACAGTGGTCAAAGAGCTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATGCAAATGTTACATTCGATCCAGAGAAGCATATCGATGCTTATCTTCCCGTTAGAGTGAACGAGCAAAGGTTGAGCAATCTGTTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACGTCAGTTCTCTGGGGATACTTCGCGTACATGGCCATTGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTATAAGGTCCTAGAAGGTTTTCATGCTTCTTTTGTGGAGTCTGTTCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATTTCCTCATTTGTTTTGGAGTGACCTGGATTCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATCAGACATCGTGTCCTTCCCAAGCTACTCCAGCCTCATTATTTGCAGGAGCTCGACGCCGTTGAGTACGAAGAAGTAACCGGTACCTCAGTTCTCTCGCTTACCCTGCCTATCAAGGAAAAGAATTCCACTCATATAGTTGATAGTGAAGATGAAGTTAAAATATGCGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAATTGAAAGTTAGAACTAAAAGCTTCAATGAGGATCGACACAATCAGATCCATCCTGACGATCCAAGGCATTGGTAA 2010 42.39 MEILRTPFRGIVDDIRGRAACYKQDWIDGRISGIGILAPTAYIFFASALPVIAFGEQLSRYTDGRLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKEREDIGGDLFLAWAGWVCAWTALLLFLLAIFNASRLINKFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPETENTSLENYQFHWVYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVVVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLNHWTVVKDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMLRSAKESIERKASDSEIYGQMQAVFLEMESNPITTTVVKELEDLKEAVMKGESKDENANVTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLIGIRHRVLPKLLQPHYLQELDAVEYEEVTGTSVLSLTLPIKEKNSTHIVDSEDEVKICDAEILDELTTHRGELKVRTKSFNEDRHNQIHPDDPRHW 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14530154 14535165 - MELO3C012936.2.1 Cme04g01067 325328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01067 669 Gene3D Helical hairpin bin 18 60 - -
Cme04g01067 669 PANTHER BORON TRANSPORTER 4-RELATED 1 665 - -
Cme04g01067 669 Pfam HCO3- transporter family 187 373 IPR011531 GO:0006820|GO:0016021
Cme04g01067 669 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Cme04g01067 669 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Cme04g01067 669 PANTHER ANION EXCHANGE PROTEIN 1 665 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01647 Cme-Chr3:25276474 Cme04g01067 Cme-Chr4:14530154 0 dispersed
Cme04g01067 Cme-Chr4:14530154 Cme12g01692 Cme-Chr12:23807349 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01067 K24194 - csv:101210964 1256.89