Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01192 ATGAGTCGGGATCTGAAGCGAGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGCATAACTCTGTTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTTGCTGGGGATTGTGCAAGTGGTCACAAGAAAGCTCATTCTGGAACAAGCTCGGAGCTGAAATGTGATATTACTGATTCCTGTTCACAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCGGGGTCACCAAGTGGGGCTGTAGCTGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTGGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAGTGCAACATTGTGGTAATGAAACGATCACAACCAAAAGTTCTTCGTTTGAACCTGGTTGGGTCTCCAAAGAAGGAACCAGAAGTTCCCTCTCCGTCACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATACTGATCCTCTAGATTTCATACGGGGACCAGTTGTGACTCCCAGTAGCAGTCCAGAATTGGGCACACCTTTTACCGCTACTGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGACACAAAGAAGGAGGAATTGTTTGTTATAAAGGAGAATAAAGAACTTGATGCTGCTAGTTCAGACTCAGATATTGAGAATTTATCTGTGTCGTCTGCAAGTTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATTAGTGGAAGATCACAGAGATGTGATGATAGGAATCAAGCGTCAACAAGAAATTCTTTTCTACTGAAGTCTTCTAAACATGACAGAGAATCAAGTATTGGAATGTCAAGCCATAGAAGTGACAATGATTTTCATGGGGACGTACGAGATGCAGTTTCATTATCCAGGAACACGCCACCAGGCCCTCCTCCATTATGTTCAATATGCCAACACAAGGCACCGGTTTTTGGAAAGCCTCCAAGGTGGTTCAGCTATGCTGAGCTGGAGCTTGCTACCGGTGGATTTTCACAAGCTAACTTTTTGGCTGAAGGAGGTTATGGATCTGTTCACAGAGGGGTACTCCCAGATGGACAGGTGGTCGCTGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAGAGAAGGTTGTTGGTGTATGAATACATCTGCAATGGTTCATTGGATTCTCATTTATATGGACGCCAACAAGAGTCACTTGAATGGTCTGCACGGCAAAAAATTGCCGTGGGAGCTGCAAGGGGGTTACGATATCTCCACGAAGAATGTAGAGTTGGTTGCATTGTTCATCGAGATATGCGGCCAAACAACATTCTTATCACACATGATTTTGAACCACTAGTTGGAGATTTTGGCCTTGCAAGGTGGCAGCCTGACGGAGATACCGGTGTTGAAACAAGAGTTATCGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACAGAAAAAGCTGATGTTTATTCCTTCGGGGTGGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTCGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCGCGCCCCCTGCTGGATGAATTTCTCATTGATGAACTAATTGATCCAAGGCTAGGAAATAGCTTTGCAGAGCATGAAGTGTACTGTATGCTGCATGCTGCATCATTATGCATCCGAAGAGATCCCAACGCAAGGCCTCGTATGTCACAGGTTTTGCGGATTCTGGAAGGCGACCTCGTCATGGATGCTAATTACTTGTCCACTCCTGGATACGATGTGGGAAACCGGAGTGGTCGGATGTGGACTGAGCAACAGCAGCAGGCACAAAACTACAGTGGCTTGTTATCGGACGAGACTGTAGAAAGGTTCAATGAAAAGGTGTGTGTTGAAAGTTTAAGACCAGGTTACTGGGAAAGAGACAAGACAAGGAGGACTTCAAGTGGAAGTGCATTGTAA 2256 44.33 MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEVPSPSPSDIDEGSESHQKENTDPLDFIRGPVVTPSSSPELGTPFTATEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDRNQASTRNSFLLKSSKHDRESSIGMSSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQESLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLGNSFAEHEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLVMDANYLSTPGYDVGNRSGRMWTEQQQQAQNYSGLLSDETVERFNEKVCVESLRPGYWERDKTRRTSSGSAL 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16312530 16318428 + MELO3C013046.2.1 Cme04g01192 325453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01192 751 MobiDBLite consensus disorder prediction 334 355 - -
Cme04g01192 751 MobiDBLite consensus disorder prediction 175 255 - -
Cme04g01192 751 Gene3D HUPs 5 151 IPR014729 -
Cme04g01192 751 SUPERFAMILY Protein kinase-like (PK-like) 389 684 IPR011009 -
Cme04g01192 751 Gene3D Transferase(Phosphotransferase) domain 1 481 685 - -
Cme04g01192 751 ProSiteProfiles Protein kinase domain profile. 405 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01192 751 PANTHER OS01G0253100 PROTEIN 15 710 IPR045271 GO:0004714|GO:0006468
Cme04g01192 751 Pfam Protein tyrosine and serine/threonine kinase 409 673 IPR001245 GO:0004672|GO:0006468
Cme04g01192 751 CDD STKc_IRAK 411 677 - -
Cme04g01192 751 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Cme04g01192 751 CDD USP_Like 19 142 - -
Cme04g01192 751 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 710 - -
Cme04g01192 751 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Cme04g01192 751 MobiDBLite consensus disorder prediction 220 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01192 Cme-Chr4:16312530 Cme10g00523 Cme-Chr10:3371185 1.02E-97 dispersed
Cme10g00750 Cme-Chr10:4810408 Cme04g01192 Cme-Chr4:16312530 1.51E-06 dispersed
Cme03g00434 Cme-Chr3:6082409 Cme04g01192 Cme-Chr4:16312530 1.16E-109 transposed
Cme03g00489 Cme-Chr3:7136649 Cme04g01192 Cme-Chr4:16312530 1.41E-78 transposed
Cme04g00634 Cme-Chr4:6199318 Cme04g01192 Cme-Chr4:16312530 0 transposed
Cme11g00380 Cme-Chr11:3826598 Cme04g01192 Cme-Chr4:16312530 7.02E-78 transposed
Cme09g01120 Cme-Chr9:15884269 Cme04g01192 Cme-Chr4:16312530 1.28E-49 transposed
Cme02g00224 Cme-Chr2:1798667 Cme04g01192 Cme-Chr4:16312530 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64810 PF07714 PK_Tyr_Ser-Thr 1.00E-40 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01192 - - csv:101206876 1468.37