Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01196 ATGGATTCTTTGTGGATATTTGTGCAGGTCATCACAGCTGCAGCTTTCATATCTTCCACAATCATAATCCTCAAAAACTTCATCATCCCCACCACACCATCATCATCTTCTTCAAACTCCTTCACCTCCTCCAACAATCCTTCACTTCCTTCCGGTTCCCTCGGTCTCCCCTTCGTTGGTGAAACCCTCCACTTCGTCTCTTCCGCTTACTCTCACCGCCCTGACACCTTCATGGATACACGTCGCAGACGGTATGGGAAGGTCTTCAAATCACATATATTTGGAAGTCCAACAATAGTTTCAACAGATGGTGAAGTGAATAGGTTTATTCTACAAAGTGATTCAAAGTATTTTGTGCCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCAATATTGCTTATCAATGGCACTTTACATAGAAGAATTCATGGTCTTATTGGAGCTTTTTTCAAATCATCTCATCTCAAAGCTCAAATAACCTTAGACATGCAAAAATATCTTCAAAAATCCATCTCTACTTGGACTAGTACTTGTCAACACAATCCTATCCACATTCAAGATGAAGCCAAAAATATTGCCTTTGAAGTACTAGTAAAGACACTGGTCAGTTTGGAGAGTGGTGAAGAAATGGAATTTCTGAAGAAACAGTTTAATCAATTCATTGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAACCACACTTTACAGATCATTACAGGCAAAAAGGAAAATGGTGAAGTTAGTGGAAGAAATAATAGAAGGAAGAAGGAAGAAGAAGAAGAAGAAGAGTGAAAAATATTGGAGTAATAATAATAATGGAGTTGCAATAATAAATGATGTTGTGGATGTTTTGTTAAACGATGGAAGCCAACAAGTAACAGATGAAGTCATAGCTCATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATCCTCATCACTTTGGCCATTAAATACCTTTCTGATTCTCCCTCTGCCCTTCAACAATTAACGGAAGAGAACATGGAATTGAAAAGACAGAAAACTCAGCTTGGAGAGCCATTGAAGTGGACTGATTACTTGTCTTTACCATTTACTCAAAATGTGATAACGGAGACGTTAAGGTTAGGAAACATAATAACAGGAGTGATGAGAAAGGCGATGAAAGATATTGAAATAAAAGGATATTTAATACCTAAAGGATGGTGTGTTCTTGCATATATTAGGTCAGTTCATGTCGATGAAAACCAGTTTGAAAGCCCTTACCATTTCAATCCATGGAGATGGCAAGGTAAAGACTCAAATAATTTAAATTTCACTCCTTTTGGAGGAGGACAAAGGTTGTGCCCTGGCCTTGAGTTAGCCAGATTAGAAGCTTCCATTTTCTTACATCACTTTATTACTGAATTCAGATTGACCAAGTAA 1431 37.88 MDSLWIFVQVITAAAFISSTIIILKNFIIPTTPSSSSSNSFTSSNNPSLPSGSLGLPFVGETLHFVSSAYSHRPDTFMDTRRRRYGKVFKSHIFGSPTIVSTDGEVNRFILQSDSKYFVPSYPKSVTELMGKSSILLINGTLHRRIHGLIGAFFKSSHLKAQITLDMQKYLQKSISTWTSTCQHNPIHIQDEAKNIAFEVLVKTLVSLESGEEMEFLKKQFNQFIAGIMAFPINIPGTTLYRSLQAKRKMVKLVEEIIEGRRKKKKKKSEKYWSNNNNGVAIINDVVDVLLNDGSQQVTDEVIAHNMIDMMIPGQDSVPILITLAIKYLSDSPSALQQLTEENMELKRQKTQLGEPLKWTDYLSLPFTQNVITETLRLGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENQFESPYHFNPWRWQGKDSNNLNFTPFGGGQRLCPGLELARLEASIFLHHFITEFRLTK 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16338502 16342331 - MELO3C013049.2.1 Cme04g01196 325457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01196 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cme04g01196 476 Gene3D Cytochrome P450 38 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 21 473 - -
Cme04g01196 476 SUPERFAMILY Cytochrome P450 46 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 Pfam Cytochrome P450 50 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01196 476 PANTHER CYTOCHROME P450 26 21 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01196 Cme-Chr4:16338502 Cme08g00892 Cme-Chr8:5856568 1.59E-162 dispersed
Cme10g01069 Cme-Chr10:9321685 Cme04g01196 Cme-Chr4:16338502 4.55E-123 transposed
Cme12g01766 Cme-Chr12:24288401 Cme04g01196 Cme-Chr4:16338502 8.81E-71 transposed
Cme01g02852 Cme-Chr1:35383310 Cme04g01196 Cme-Chr4:16338502 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01196 K12638 - csv:101212581 866.685