Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01362 ATGGACCCTTCTCTTGAACTTTCGGAAACGCCTGAGCAGATTATACTACGCTGGGATTCCGCCGCCCCCGATGAGGTCAAAGATAAGATGATTTTTGACTCCGATAGGGAAGAGATCGACCGTTACTTGCAGGCTGTCGATGAAATCCAGAGGTCTATCTCCTCTGCTCCCATTTCTGACGATCACAACAAAGCTGATTCCACTATGCAGATCGCTATGGCTAGGCTTGAAGATGAGTTTCGTCACATTCTCTCCAGTCATACCACTCCGATCGAGGTTGACTCGCTTACCGATCCCAGTCCCTCTTCTCGTTCTATGTCCACTAGTGCTAGTGGTGTGTTCGAGGATGAAAACGACGATGAACCCGACTTACAGGAAGTTCAGCTTGATTTAACAGGTAGTCCAAGTTTTGGGTCCAGTGGTCGATCCAGCTACCGGGCGACTAGCAGTATTCGTGAAATTGATCTCATACCTTCCGATGCGGTTATTGATCTACGAAGTATTGCTGAGAGGATGATTTCGGCGGGTTACCTGCGCGAGTGCATCCAAGTTTATGGCAGTGTGCGTAAGTCCACCTTCGATTCCAGCTTCCGGCGGCTCGGAATTGAAAAACTAAGCATTGGAGATATCCAGAGGCTGGATTGGAACGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCTAAGGTTTCTATTAGGACTTTGTTTTCCAGTGAGAAGAAACTTTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGATGATGCTTGTTTCATGGAGACCGTAAAAGGTCCTGTGACTCAGTTGTTCAATTTCGCAGAGGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTGACGGAGTTGATATCTGACATTGATGTGATATTCGAATCAAAATCCGCGGAGTATATTCGGATTCAGGCCGCGGAGATAGTGTCGCGGCTAGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCAGTGCTGCGGGAGCCGTCGCTGCATCCAGTTCCCGGCGGGACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCTCGATTCCAGATATGGACTTCGGTGAGCTAGAGGGAAAAACGCCATTAGCGCTCCATCTTATATGGAGTATCGTGATTCTGCAATTCAACTTGGAGGGCAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAAAAGATAAAAGGATCCCCGGAGTTGCGAGAAATGATCGGAGATGTTTATCTGAAAAGACTTACCGGGAAGTATCGACAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTACGAAACGAAGGGTTGAATGTGGGGGGGAGCTTATCTTCCGGCCCTGCAAAGAGCCTAATTAGAGATAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACCGGACACAATCATCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTACGCATATCCATAATTGAGAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAGACACCCCGAAAATTACATCAAATACTCGGTTGAGGAACTCGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCTGTAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 48.28 MDPSLELSETPEQIILRWDSAAPDEVKDKMIFDSDREEIDRYLQAVDEIQRSISSAPISDDHNKADSTMQIAMARLEDEFRHILSSHTTPIEVDSLTDPSPSSRSMSTSASGVFEDENDDEPDLQEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTELISDIDVIFESKSAEYIRIQAAEIVSRLAEAVRGTLSEFENAVLREPSLHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPSIPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKYRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSSWLIPDSQLREELRISIIEKLIPAYRSFLGLHGHHIESGRHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19219097 19221572 - MELO3C022677.2.1 Cme04g01362 325623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01362 610 Gene3D Exocyst complex component Exo70 124 606 - -
Cme04g01362 610 Gene3D Exocyst complex component Exo70 14 121 - -
Cme04g01362 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 7 609 - -
Cme04g01362 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 609 IPR004140 GO:0000145|GO:0006887
Cme04g01362 610 MobiDBLite consensus disorder prediction 90 121 - -
Cme04g01362 610 Pfam Exo70 exocyst complex subunit 224 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme04g01362 610 SUPERFAMILY Cullin repeat-like 11 597 IPR016159 -
Cme04g01362 610 MobiDBLite consensus disorder prediction 90 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01362 Cme-Chr4:19219097 Cme12g01592 Cme-Chr12:23218332 2.75E-154 dispersed
Cme12g00256 Cme-Chr12:2931087 Cme04g01362 Cme-Chr4:19219097 2.58E-96 dispersed
Cme12g01942 Cme-Chr12:25362669 Cme04g01362 Cme-Chr4:19219097 1.21E-95 dispersed
Cme04g01362 Cme-Chr4:19219097 Cme11g01259 Cme-Chr11:19404241 4.82E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01362 K07195 - csv:101204229 1159.05