Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g01519 | ATGGTGAAGAAGTGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGATTAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTATCGGCTCTAAATGCCATGTATAGTAGTTTAAACTCTCCTCCAATTCTAACACAATGGAGTTCGAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCATTACTTGCTTGGGCTTAAGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGAACAATGGGATATCAGCTCTCGAGTTTGACATCCCTAACTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAGCTCCCTCAAAACTTGCAAAAATTAAACCTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTTGCTTATTTCCTTAAACATGAGCCACAATCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGGCCATGTTGGACATCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTTAACGCAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGTTGGGTTCCTGAACGATTGAAGAATATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGATTTGCACCCCCACCTCCACCTGGGACTCCTCCAGCCAACCAAAATTACAGATATCACAAGGCTGGTAACAGTTACAGCCCACTGGGTAGTGATGCTGCTGGTGGAGGTAGCAATGGATCAGGAATCGGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTCGTAGGAGCTATACTAGCATATCTTCTTGTAAAGAGAACATCCAAGAGGCCATCCACAGACGTAGAAAAGCAAAAGCATGGGAACTTGCCTATTGTATCTCCTGCTTCAAATGAAGTGCAAGATGCATTGGCAGAGATGAAGCTTGTTCATACTTCATCATCATTTGATGCAAAAGAATTGGAATCTCCTGCTTTAATCAATCTCAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAATGATACATCAAAGATACCCGTGGTGAAAAAGACCAATGTCACTGCTCCATTAAGTGTGAAATCATACTCAATAGCAGATCTGCAAATGGCTACGGGTAGTTTCAATGTAGAAAACCTTCTTGATGAGGGATCACTTGGACGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGTAGTGAAGAAAATAGATTCAGCTGCCTTCCGTAGAGAATTGTTGGAAGATTTCACGGAGATCGTTGCTAATATATCTCAGCTGCATCATCCGAATGTAACCGAGCTAATGGGCTATTGCTCAGAGCATAGCCTGCATTTGCTAATATACGAGTTCCATAAGAATGGGTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTAGGGACGGCCCGTGCTTTAGAGTACCTACATGAAGTTTGTTCCCCGTCAGTTGTTCACAGAAATATCAAGTCAGCCAATATCTTATTAGATGCCGAAATGAATCCTCATCTCTCCGATTGTGGTCTGGCTAGCTTTATAACCAATCTAGATCAGGCATTGGATCAGCAGACAGGATCTGGGTACAGTGCTCCTGAGGTTACCATGTCTGGTCAATATACATTAAAAAGCGACGTATATAGCTTTGGAGTGGTGATGTTAGAACTTCTAAGCGGACGTAAGCCATTTGATAGTTCAAGACCAAGGGCTGAGCAATCCTTGGTTCGATGGGCTACGCCTCAGCTCCATGATATTGATGCCTTGACAAAAATGGTTGATCCTGCACTGAAAGGGCTCTATCCTGTTAAGTCTCTCTCAAGATTTGCAGATGTTGTAGCTCTCTGCGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCGGAGGTGGTGGAAGCGTTGGTTCGGCTGGTGCAGAGATCCAACATGAGCAGGAGAACATTTGGAAGTGATCATGGATCATCTTTTAGAACCGATGATCTTGATGCATGCAAAACATCTTAA | 2181 | 43.1 | MVKKWSWGEPLLLVSICILGWRISFINGATDPGDVSALNAMYSSLNSPPILTQWSSSGGDPCGQIWKGITCLGLRVTEISLSGLGLSGTMGYQLSSLTSLTNLDVSNNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSISQMSLLISLNMSHNQLQNQVNDMFWKLSSLAMLDISFNFLSGALPQSFSNLTSLNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGFAPPPPPGTPPANQNYRYHKAGNSYSPLGSDAAGGGSNGSGIGGGAIAGILISVLVVGAILAYLLVKRTSKRPSTDVEKQKHGNLPIVSPASNEVQDALAEMKLVHTSSSFDAKELESPALINLKPPPIDRHKSFDDNDTSKIPVVKKTNVTAPLSVKSYSIADLQMATGSFNVENLLDEGSLGRVYRAQFNDGKVLVVKKIDSAAFRRELLEDFTEIVANISQLHHPNVTELMGYCSEHSLHLLIYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCSPSVVHRNIKSANILLDAEMNPHLSDCGLASFITNLDQALDQQTGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDLDACKTS | 726 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21789300 | 21797787 | - | MELO3C026658.2.1 | Cme04g01519 | 325780 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g01519 | 726 | Pfam | Leucine rich repeat N-terminal domain | 33 | 71 | IPR013210 | - | |
Cme04g01519 | 726 | SUPERFAMILY | L domain-like | 30 | 236 | - | - | |
Cme04g01519 | 726 | Pfam | Protein tyrosine and serine/threonine kinase | 423 | 693 | IPR001245 | GO:0004672|GO:0006468 | |
Cme04g01519 | 726 | ProSiteProfiles | Protein kinase domain profile. | 421 | 696 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme04g01519 | 726 | MobiDBLite | consensus disorder prediction | 706 | 726 | - | - | |
Cme04g01519 | 726 | Gene3D | Transferase(Phosphotransferase) domain 1 | 500 | 717 | - | - | |
Cme04g01519 | 726 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 20 | 720 | - | - | |
Cme04g01519 | 726 | Gene3D | Ribonuclease Inhibitor | 31 | 249 | IPR032675 | - | |
Cme04g01519 | 726 | PANTHER | OS01G0253100 PROTEIN | 20 | 720 | IPR045271 | GO:0004714|GO:0006468 | |
Cme04g01519 | 726 | Pfam | Leucine rich repeat | 121 | 178 | IPR001611 | GO:0005515 | |
Cme04g01519 | 726 | SUPERFAMILY | Protein kinase-like (PK-like) | 402 | 693 | IPR011009 | - | |
Cme04g01519 | 726 | MobiDBLite | consensus disorder prediction | 711 | 726 | - | - | |
Cme04g01519 | 726 | Gene3D | Phosphorylase Kinase; domain 1 | 383 | 498 | - | - | |
Cme04g01519 | 726 | CDD | STKc_IRAK | 427 | 696 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02755 | Cme-Chr1:34670615 | Cme04g01519 | Cme-Chr4:21789300 | 0 | dispersed | |
Cme03g00822 | Cme-Chr3:15445884 | Cme04g01519 | Cme-Chr4:21789300 | 0 | dispersed | |
Cme04g01519 | Cme-Chr4:21789300 | Cme12g00906 | Cme-Chr12:15934595 | 0 | dispersed | |
Cme04g01519 | Cme-Chr4:21789300 | Cme08g00325 | Cme-Chr8:2068138 | 9.96E-145 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64814 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-41 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g01519 | - | - | csv:101208239 | 1360.9 |