Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01532 ATGGGCGGCCGCTCGGTGTTCACTTTGGCTGAGGTTGCTTCCCATGACAATCGCAACGATTGCTGGTTGATCATTGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGATGTCGGGCACAGTAGCACTGCCAGAGCAATGATGGAAGAATTCTATGTCGGCGATATCGATAGCTCAACTATTCCTGCAAAAAGAGAGTATACTCCTCCAAAGCAACCCCTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATATCAAAACAACTTAA 402 45.02 MGGRSVFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSTARAMMEEFYVGDIDSSTIPAKREYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYIKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22065146 22067445 + MELO3C026666.2.1 Cme04g01532 325793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01532 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cme04g01532 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cme04g01532 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cme04g01532 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cme04g01532 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cme04g01532 133 PANTHER CYTOCHROME B5 1 131 - -
Cme04g01532 133 Gene3D - 3 85 IPR036400 -
Cme04g01532 133 PANTHER - 1 131 - -
Cme04g01532 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Cme04g01532 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cme04g01532 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Cme04g01532 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01532 Cme-Chr4:22065146 Cme09g02007 Cme-Chr9:23822042 8.29E-51 dispersed
Cme04g01532 Cme-Chr4:22065146 Cme05g00704 Cme-Chr5:8215431 1.85E-64 transposed
Cme04g01532 Cme-Chr4:22065146 Cme06g00386 Cme-Chr6:2431054 2.27E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01532 K23490 - csv:101212882 270.781