Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01582 ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGAAAAGGAGCATATGGGCGAGTCTACAAGGGTCTGGATTTGGAGAATGGAGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGATCCAGCAATATCATAACATTGGTTATAAAATTATTGCTCAACTTCTCTCCAACAGGCTTAAGCATGTCTTGCCACTCACTAAGAACTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTTTGAAAACAAAGACTCACCTTCACATAATACTTGAGTATGTGGAGAATGGATCACTTGCCAACATCATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCGTTGGTTGCTGTTTATATTTCTCAGGGGCATGGATTATATAATTGTTATACTGTCATAAAACAGGTTTTGGAAGGTTTGGTTTATCTACATGAGCAGGGTGGCCTTGTGAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCCGATGTTAATACTCATTCTGTTGTTGGAACACCTTACTGGATGGCACCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATATGGAGTGTTGGATGTACAGTGATTGAACTGCTTACATGCGTACCTCCATATTATGATCTACAACCTATGCCTGCTCTCTTTCGCATTGTACAAGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCTGATGCAAAAACTTTGCTTTCTCATCCTTGGATACAGAACTGTCGGCGAGCTTTACATTCTTCTCTTCGTCATAGTGGCACATTGAGAAACGTCCAACAAGATGGATCAATTGAAGCAGAAATTTCTACTGGAGACAATCAAAACTCTTGCGAAAGCCCTTCGGCAGAGAAAAATGAAGTCGCTGATTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCGTCAGATGTCGCCACTGATGCGAGCAAGTCCCAAAAGCATTTTGCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGTCTAGAAGAAGATACCCTATTGGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCCGGCAGACTTGCTACCTCTGGGCCAACTGAGTTTCATGAATCTCATGGCAGAGCCCATGACGAAGTGATAATGAACGGCGAAGTTCCATTGACAGAATTAAGGAAAGATGCTTCTAGAAAACAGGGAGAGCAAGAAACTTCTACAACATCTGGAAGGAGATCATTTGGTTTTGAACCTGAAAGTCAGGATAATAGTTTTCAAAAGGTGTCAAAGATGTCGATTGCTTTGGGAGGAGATGAGCTGAGTAAATTTAGTGATACTCCTGGAGATGCTTCCTTAGATGATTTATTCCAACCTCTAGATAAGCACTCTGGGGATCAAGCTACTGGAGCATCAACATCTCTATCTATTCTACAATCAAACATGGGTAATGTGCCAGTAAATGATGTTGGGAAAAATGACCTGGCTACGAAGTTGAGGGCTACAATTGCTCAAAAACAAATGGAGAATGAAATGGGACAGGCAAGTGGTGGGGGTGACCTGCTTCGACTAGTGATGGGCGTTTTGAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCTGGAGAAACCCTTTTTCCTTTGCAGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTACCTGTCAAAAACTGATAGCTATCTTTCATCAAAGACCTGAGCAGAAAATTGTCTATGTTACACAGCATGGCCTACTCCCATTAACTGAATTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCGGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAATGTTGACTTCCAAGAAAATGCCTGTCTTGTCGGTATGATTCCTCTGGTAATGGGCTTTGCAGTCCCGGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTCTTTCAACAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTCGCATGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCCGATTATGCAAAGTACAGGGACATGGTTCACCTAGCCATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTGAACGAGGCAACTCGCTTAGCTTCCATAACAGTTGGGGCGGGATATCCAGTTGATGGTTTAACTCAACGGCCACGATCTGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTACGAGGCTTCATTCCCTATGCCTGATCAACCTGATCTTTTGAAGGTCAGGCATGGTATAGTTGATCATCATTCGTCTACTGGACCACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATACCAATCAATCTGATTACCGACACTTTCCCACAGAGACTGATAGGCCTGACAGGCCTCAATCTAGCAATGCCACAAATGAAGCCCTGGGATCTAAACCGTCAGAGCTTGCATCTTTGGATAAAGTTTTACATTTAGCAAGTAAGGAACCTTCTGGCTCGGCTTCCAAAGACCATGAAAATGCAGATAGATGGAGAACTGATAGAATGGCCAACTCTAATAGGACTTCCACAGATAGGCCTCCGAAATTTGTGGAACCTGCATCTAATGGATTTTCTACAACATTGGTGGCTACTCAGCAAGAGCAAGTTCGACCCCTTCTAAGTCTGTTGGACAAAGAGCCCCCGTCTCGACATTTTTCTGGTCAGCTCGAGTACATGCGCCAACTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAAGATAAATGGGGAACCTGATTTCTTAATGGCAGAATTCGCAGAGGTCTCCCAACGCGGAAAAGACAATGGAAACCTTGACCCCGCTTCTAAGGTTTCTCTTAAAACGGCAGCAAAGAAGGTAGGGCCCCTGATTTCCAATGAAGGAGCTGCATCCACGTCTGGAATTGCTTCACAGACAGCTTCTGGGGTACTTTCAGGTTCGGGTGTATTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCACACATGGTGTCAACTCTGAATGCTGATGTTGCGAGGGAATACCTGGCGAAGGTGGCTGATCTATTGCTTGAGTTTGCTCAGGCAGATACAACTGTGAAGTCATATATGTGCAGCCAAAGCTTACTTAATCGGCTTTTTCAAATGTTCAATAGGGTAGAGCCTTCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAATTGCTTAGAAAATCTTCAGCGAGCAGATGCAATAAAATATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCACTGGTGTCACAAATACATACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTAATGCATTTTATTATATCAGACTCTCCTTTGAAACAATATGCATTGCCTCTGCTGTGTGATATGGCCCATGCATCTCGTAATTCCAGGGAGCAGTTAAGAGCCCACGGCGGATTAGATGTGTACTTGAGCCTACTTGAAGATGACCTTTGGTCAGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCACGATAATGACAACCGAAAAGTTGAGCAAGCTTTGCTCAAAAAGGATGCAGTTCAGAAATTGGTTAAGTTTTTCCAGTGCTGTCCAGAACAACATTTTGTCCATATTTTGGAGCCGTTCTTGAAAATCATCACGAAATCTTCTCGAATCAATACGACACTGGCTGTCAACGGATTGACCCCGTTGCTTATAGCAAGACTCGACCACCAAGATGCAATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCGGTGTACGAGCATCATCCACGACCCAAGCAGTTGATTGTCGAGAATGATTTACCTCATAAACTTCAAAATTTGATTGAGGAACGTAGGGATGGACAACGATCTGGAGGGCAAGTGTTGGTGAAACAAATGGCAACATCTCTCCTTAAAGCTCTTCATATAAATACCGTTTTGTAA 4332 42.31 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMIQQYHNIGYKIIAQLLSNRLKHVLPLTKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQGHGLYNCYTVIKQVLEGLVYLHEQGGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNVQQDGSIEAEISTGDNQNSCESPSAEKNEVADSDFKADSRKELSSDVATDASKSQKHFASGPNFVEEGESLEEDTLLDQVPTLSIHENSSLLTGSGRLATSGPTEFHESHGRAHDEVIMNGEVPLTELRKDASRKQGEQETSTTSGRRSFGFEPESQDNSFQKVSKMSIALGGDELSKFSDTPGDASLDDLFQPLDKHSGDQATGASTSLSILQSNMGNVPVNDVGKNDLATKLRATIAQKQMENEMGQASGGGDLLRLVMGVLKDDDIDIDGLVFDEKLPGETLFPLQAVEFGRLVGSLRPDEPEDVIVSTCQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGMIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRDMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLTQRPRSGQLDPSHPIFSQYEASFPMPDQPDLLKVRHGIVDHHSSTGPPEPSRASTSHSQRSDTNQSDYRHFPTETDRPDRPQSSNATNEALGSKPSELASLDKVLHLASKEPSGSASKDHENADRWRTDRMANSNRTSTDRPPKFVEPASNGFSTTLVATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRQLSGLERHETIMPLLHASNEKKINGEPDFLMAEFAEVSQRGKDNGNLDPASKVSLKTAAKKVGPLISNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPSILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDDLWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23117579 23136175 + MELO3C024030.2.1 Cme04g01582 325843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01582 1443 MobiDBLite consensus disorder prediction 320 337 - -
Cme04g01582 1443 PANTHER MAP KINASE KINASE KINASE 2 1399 - -
Cme04g01582 1443 ProSiteProfiles Protein kinase domain profile. 20 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01582 1443 MobiDBLite consensus disorder prediction 487 517 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 338 358 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 875 889 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 890 906 - -
Cme04g01582 1443 Gene3D Transferase(Phosphotransferase) domain 1 143 371 - -
Cme04g01582 1443 SUPERFAMILY Protein kinase-like (PK-like) 10 304 IPR011009 -
Cme04g01582 1443 Pfam Protein kinase domain 21 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01582 1443 SUPERFAMILY ARM repeat 1104 1417 IPR016024 -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 859 874 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 449 472 - -
Cme04g01582 1443 SUPERFAMILY ARM repeat 606 800 IPR016024 -
Cme04g01582 1443 SMART arm_5 719 762 IPR000225 GO:0005515
Cme04g01582 1443 SMART arm_5 634 674 IPR000225 GO:0005515
Cme04g01582 1443 SMART arm_5 1177 1221 IPR000225 GO:0005515
Cme04g01582 1443 SMART arm_5 1223 1262 IPR000225 GO:0005515
Cme04g01582 1443 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1399 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 925 943 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 320 374 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 851 907 - -
Cme04g01582 1443 Gene3D Phosphorylase Kinase; domain 1 13 130 - -
Cme04g01582 1443 Gene3D - 600 803 IPR011989 -
Cme04g01582 1443 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Cme04g01582 1443 CDD STKc_Cdc7_like 19 292 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 920 958 - -
Cme04g01582 1443 MobiDBLite consensus disorder prediction 439 472 - -
Cme04g01582 1443 Gene3D - 1094 1438 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01582 Cme-Chr4:23117579 Cme05g00263 Cme-Chr5:1916073 2.39E-55 dispersed
Cme04g01582 Cme-Chr4:23117579 Cme08g00551 Cme-Chr8:3459611 8.40E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64816 PF00069 Pkinase 4.90E-44 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01582 - - cmo:103500361 2729.12