Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01598 ATGTTGAGCTCCGTAAACCTCACCGCTATCTCCTCCGGTGAATTCCCATCTCAGAGATTGGTTGCATGGAAGCTCTTCTTCTTACCCGACATTCAAATGTTAGAGATATTCATAGCAATTTTTATTTTTACAGCAATAAGATCATTGAGGCAAAGAAGAAAACAGGGGCTACCGGTGTGGCCGGTTGTCGGAATGTTACCGTCTTTAGTCACTGGACTCCGAAGCAACTTGTATGAATGGATCACTGAAGTGCTATACCATCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTTAGTAGCTTGCATTGTGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCTCAAGTACCCAAAAGGCTCCTTCTTCCGTGAAACAGTCCATGACCTTCTCGGTGATGGAATTTTCAACGCCGACGGCGAGATTTGGCACAAGCAGAGGAAGACAACCAGCATCGAATTCCATTCAGCAAAGTTTCGACAACTCACTGTTGAGTCCCTCCACGTGTTAGTCCATTCTCGGCTCCTCCCTATTTTCGACAGACATTTCGTCGAACACTTGGTGCCCATTGATCTCCAAGACATTCTTCTACGCCTAACTTTCGACAATGTCTGTATGATCGCCTTCGGCGTTGACCCCGGCTGTTTGAGCCCTAATTTACCAGCGATTCCCTTCGCCAACGCCTTCGAGGTGGCAACGGAAGCCACCGTTCTTCGATTCGTAACACCGCAATTCATATGGAAAACAATGAGGTATTTCAATTTAGGAACAGAAAAGAGTCTCAAATTCGCCCTAAAAGAGGTCAATGAATTCGCAATGAACGTAATTGAAAAGAGAAGAAGAGAGAAGGTCAATGAAATCGAGAGATCGGACCTGTTATCAGTGTTTATGGGACTGAAGGACGAGAACGGGGAGCCATATTCGGACAAGTTCTTGAAAGATATATGCGTGAATTTTATACTTGCGGGAAGAGATACGTCGTCAGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATGGGAATCCAGAAGTGGAAGAGAGAATTCTGGAGGAGATCTTCCGGATATTGAAGAAGAGAGGAGAGGCGGGGGAGGGATCGTCGGCCGGCAATGTGAGGTTTGAAGTAGAAGAGATAAAGAAGATGGAATATTTGGAAGCCGCTATTTCTGAAGCTTTGAGATTGTTCCCTTCCGTGCCCGTTGATCACAAGGAGGTTATTAAAGATGATGTATTACCAGATGGAACACAGCTAAAGAAAGGAACAAAACCAGAGAGATGGTTGAAAGATGGTCGATTTATGACCGAGTCAGCGTATCGGTTCACACCTTTCAATGGGGGGCCTCGATTGTGCTTGGGAAAGGATTTTGCATACTACCAAATGAAGTACATTTCTGCCTCTATCATCCTCCGCTACCGTGTCAAAGTGGCAGAGAAACACCTTGTGGTTCCAAAGCTTGCTTTGACAATGTACATGAAATACGGCTTAAAGGTGAATTTGTTTAAACGTGACAAGAAAGAGATCGAAAAGTATTTCTAA 1557 44.32 MLSSVNLTAISSGEFPSQRLVAWKLFFLPDIQMLEIFIAIFIFTAIRSLRQRRKQGLPVWPVVGMLPSLVTGLRSNLYEWITEVLYHQNGTFRFKGPWFSSLHCVVTSDPRNIEHILKTEFLKYPKGSFFRETVHDLLGDGIFNADGEIWHKQRKTTSIEFHSAKFRQLTVESLHVLVHSRLLPIFDRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVDPGCLSPNLPAIPFANAFEVATEATVLRFVTPQFIWKTMRYFNLGTEKSLKFALKEVNEFAMNVIEKRRREKVNEIERSDLLSVFMGLKDENGEPYSDKFLKDICVNFILAGRDTSSVALSWFFWLIDGNPEVEERILEEIFRILKKRGEAGEGSSAGNVRFEVEEIKKMEYLEAAISEALRLFPSVPVDHKEVIKDDVLPDGTQLKKGTKPERWLKDGRFMTESAYRFTPFNGGPRLCLGKDFAYYQMKYISASIILRYRVKVAEKHLVVPKLALTMYMKYGLKVNLFKRDKKEIEKYF 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23256961 23264383 - MELO3C024015.2.1 Cme04g01598 325859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01598 518 Pfam Cytochrome P450 57 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 Pfam Cytochrome P450 429 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cme04g01598 518 PANTHER CYTOCHROME P450 86B1-LIKE 21 429 - -
Cme04g01598 518 Gene3D Cytochrome P450 39 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 SUPERFAMILY Cytochrome P450 56 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01598 518 PANTHER CYTOCHROME P450 21 429 - -
Cme04g01598 518 PANTHER CYTOCHROME P450 86B1-LIKE 429 510 - -
Cme04g01598 518 PANTHER CYTOCHROME P450 429 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01598 Cme-Chr4:23256961 Cme09g01772 Cme-Chr9:22177392 1.77E-138 dispersed
Cme01g02420 Cme-Chr1:32482869 Cme04g01598 Cme-Chr4:23256961 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01598 K15402 - csv:101222831 702.59