Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g01598 | ATGTTGAGCTCCGTAAACCTCACCGCTATCTCCTCCGGTGAATTCCCATCTCAGAGATTGGTTGCATGGAAGCTCTTCTTCTTACCCGACATTCAAATGTTAGAGATATTCATAGCAATTTTTATTTTTACAGCAATAAGATCATTGAGGCAAAGAAGAAAACAGGGGCTACCGGTGTGGCCGGTTGTCGGAATGTTACCGTCTTTAGTCACTGGACTCCGAAGCAACTTGTATGAATGGATCACTGAAGTGCTATACCATCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTTAGTAGCTTGCATTGTGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCTCAAGTACCCAAAAGGCTCCTTCTTCCGTGAAACAGTCCATGACCTTCTCGGTGATGGAATTTTCAACGCCGACGGCGAGATTTGGCACAAGCAGAGGAAGACAACCAGCATCGAATTCCATTCAGCAAAGTTTCGACAACTCACTGTTGAGTCCCTCCACGTGTTAGTCCATTCTCGGCTCCTCCCTATTTTCGACAGACATTTCGTCGAACACTTGGTGCCCATTGATCTCCAAGACATTCTTCTACGCCTAACTTTCGACAATGTCTGTATGATCGCCTTCGGCGTTGACCCCGGCTGTTTGAGCCCTAATTTACCAGCGATTCCCTTCGCCAACGCCTTCGAGGTGGCAACGGAAGCCACCGTTCTTCGATTCGTAACACCGCAATTCATATGGAAAACAATGAGGTATTTCAATTTAGGAACAGAAAAGAGTCTCAAATTCGCCCTAAAAGAGGTCAATGAATTCGCAATGAACGTAATTGAAAAGAGAAGAAGAGAGAAGGTCAATGAAATCGAGAGATCGGACCTGTTATCAGTGTTTATGGGACTGAAGGACGAGAACGGGGAGCCATATTCGGACAAGTTCTTGAAAGATATATGCGTGAATTTTATACTTGCGGGAAGAGATACGTCGTCAGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATGGGAATCCAGAAGTGGAAGAGAGAATTCTGGAGGAGATCTTCCGGATATTGAAGAAGAGAGGAGAGGCGGGGGAGGGATCGTCGGCCGGCAATGTGAGGTTTGAAGTAGAAGAGATAAAGAAGATGGAATATTTGGAAGCCGCTATTTCTGAAGCTTTGAGATTGTTCCCTTCCGTGCCCGTTGATCACAAGGAGGTTATTAAAGATGATGTATTACCAGATGGAACACAGCTAAAGAAAGGAACAAAACCAGAGAGATGGTTGAAAGATGGTCGATTTATGACCGAGTCAGCGTATCGGTTCACACCTTTCAATGGGGGGCCTCGATTGTGCTTGGGAAAGGATTTTGCATACTACCAAATGAAGTACATTTCTGCCTCTATCATCCTCCGCTACCGTGTCAAAGTGGCAGAGAAACACCTTGTGGTTCCAAAGCTTGCTTTGACAATGTACATGAAATACGGCTTAAAGGTGAATTTGTTTAAACGTGACAAGAAAGAGATCGAAAAGTATTTCTAA | 1557 | 44.32 | MLSSVNLTAISSGEFPSQRLVAWKLFFLPDIQMLEIFIAIFIFTAIRSLRQRRKQGLPVWPVVGMLPSLVTGLRSNLYEWITEVLYHQNGTFRFKGPWFSSLHCVVTSDPRNIEHILKTEFLKYPKGSFFRETVHDLLGDGIFNADGEIWHKQRKTTSIEFHSAKFRQLTVESLHVLVHSRLLPIFDRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVDPGCLSPNLPAIPFANAFEVATEATVLRFVTPQFIWKTMRYFNLGTEKSLKFALKEVNEFAMNVIEKRRREKVNEIERSDLLSVFMGLKDENGEPYSDKFLKDICVNFILAGRDTSSVALSWFFWLIDGNPEVEERILEEIFRILKKRGEAGEGSSAGNVRFEVEEIKKMEYLEAAISEALRLFPSVPVDHKEVIKDDVLPDGTQLKKGTKPERWLKDGRFMTESAYRFTPFNGGPRLCLGKDFAYYQMKYISASIILRYRVKVAEKHLVVPKLALTMYMKYGLKVNLFKRDKKEIEKYF | 518 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23256961 | 23264383 | - | MELO3C024015.2.1 | Cme04g01598 | 325859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g01598 | 518 | Pfam | Cytochrome P450 | 57 | 429 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | Pfam | Cytochrome P450 | 429 | 492 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506|GO:0016705 | |
Cme04g01598 | 518 | PANTHER | CYTOCHROME P450 86B1-LIKE | 21 | 429 | - | - | |
Cme04g01598 | 518 | Gene3D | Cytochrome P450 | 39 | 517 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | SUPERFAMILY | Cytochrome P450 | 56 | 509 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | P450 superfamily signature | 393 | 404 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme04g01598 | 518 | PANTHER | CYTOCHROME P450 | 21 | 429 | - | - | |
Cme04g01598 | 518 | PANTHER | CYTOCHROME P450 86B1-LIKE | 429 | 510 | - | - | |
Cme04g01598 | 518 | PANTHER | CYTOCHROME P450 | 429 | 510 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01598 | Cme-Chr4:23256961 | Cme09g01772 | Cme-Chr9:22177392 | 1.77E-138 | dispersed | |
Cme01g02420 | Cme-Chr1:32482869 | Cme04g01598 | Cme-Chr4:23256961 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g01598 | K15402 | - | csv:101222831 | 702.59 |