Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01649 ATGAAATTTCTGCTTGAAGCTAAATTTTCAGACATTGTAAAGAACTTTTTGGTTGTCCTGGCTGAGAATGGAAGGCTGAGATATATAGATCGCATAGCAAAGAGAATTTTGGAGTTGACCATGGCTCATAAGGGAGAAGTTAAAGCCATTGTTACAACTGTAAAAACCAACTTCTTATCTACCGAGTTCAACGTGCGAACACATAGCTCTCGGTGCTTTGTAGTTCTTCGTAGGCCCATTCCAGCACAAGAAGAGAAAGAATTGAAGGAGACATTGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGATCGATCCCAACATCCTTGGTGGTTTAGTTGTAGAATTTGGCGAGAAGGTGTTTGATATGTCCATTAAAACACGGGCACTTCAAATGGAGAGGTTCTTGCGCCAACCTGTAACTCTTGATGGAGTGTTGAAGGCCCCACTTCTTGCCGTATGCTTTTATGATCCATCTTCATGGGGAAGTTTCAGCAGCCTCAAGTAA 519 42.0 MKFLLEAKFSDIVKNFLVVLAENGRLRYIDRIAKRILELTMAHKGEVKAIVTTVKTNFLSTEFNVRTHSSRCFVVLRRPIPAQEEKELKETLQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQMERFLRQPVTLDGVLKAPLLAVCFYDPSSWGSFSSLK 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23762004 23766043 - MELO3C030924.2.1 Cme04g01649 325910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01649 172 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 102 121 IPR020781 GO:0015986|GO:0016020|GO:0046933
Cme04g01649 172 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 6 142 - -
Cme04g01649 172 PANTHER ATP SYNTHASE DELTA CHAIN 6 142 IPR000711 GO:0015986|GO:0046933
Cme04g01649 172 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 4 46 IPR026015 -
Cme04g01649 172 Pfam ATP synthase delta (OSCP) subunit 65 138 IPR000711 GO:0015986|GO:0046933
Cme04g01649 172 Pfam ATP synthase delta (OSCP) subunit 4 55 IPR000711 GO:0015986|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g02473 Cme04g01649 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02473 Cme-Chr1:32888430 Cme04g01649 Cme-Chr4:23762004 1.18E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01649 K02137 - tcc:18614630 182.185