Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01686 ATGCCGATCGATACAACTGCAGTTTCAGGTCAAATTGTGTGTGTCACCGGCGCCGGAGGATTCATTGCTTCATGGCTTGTAAAGCTCCTTCTTGAGAAAGGATACATTGTTAGAGGAACTGTTAGAAACCCACGTGACCAAAAGAATGCTCATTTGAGAAACTTACAAGGAGCCAAAGAGAGACTTTCTTTGTTTAGTGCTGATCTTCTTGATTTTGAAAGCCTTAAAGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACCGCGTCTCCTGTCACCGATGATCCCGAAAAGGTGGAACAAGCCATAATTGGGACAAAGAATGTCATGATCGCCGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAATCGTAGTCCGGACATGGTGGTGGACGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAAAACACAAAGAATTGGTATTGCTATGCAAAGACAAAGGCAGAACAAGCAGCATGGGAAGTAGCAAAAGAAAGAGGAATCGATCTTGTAGTATTGAATCCAATGTTGGTATTGGGACCAATGTTGCAGGAAGGAGTGAATGCAAGTGTTGTTCATATAATGAAATATTTGACAGGATCAACAAAGACATATGTAAATGCAGTACAAGGTTATGTTGATGTTAAGGATGTTGCTAAAGCTCATCTTTTGGTCTATGAAACTTCCTCAGCCTCAGGAAGATATATTTGTGTTGAAAGTATGCTTCATCGTGGTGAATTAGTTGATATTCTTGCTGATTTCTTCCCTCAATATCCTCTTCCTACCAAGTAA 828 41.91 MPIDTTAVSGQIVCVTGAGGFIASWLVKLLLEKGYIVRGTVRNPRDQKNAHLRNLQGAKERLSLFSADLLDFESLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMIAAAEANVRRVVFTSSIGTVYMNPNRSPDMVVDESCWSDLEFCKNTKNWYCYAKTKAEQAAWEVAKERGIDLVVLNPMLVLGPMLQEGVNASVVHIMKYLTGSTKTYVNAVQGYVDVKDVAKAHLLVYETSSASGRYICVESMLHRGELVDILADFFPQYPLPTK 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24147441 24148726 + MELO3C023940.2.1 Cme04g01686 325947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01686 275 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 275 - -
Cme04g01686 275 Pfam NAD dependent epimerase/dehydratase family 13 241 IPR001509 -
Cme04g01686 275 CDD FR_SDR_e 13 275 - -
Cme04g01686 275 Gene3D - 3 275 - -
Cme04g01686 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 275 - -
Cme04g01686 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 273 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01686 Cme-Chr4:24147441 Cme04g01730 Cme-Chr4:24865012 0 dispersed
Cme04g01685 Cme-Chr4:24140189 Cme04g01686 Cme-Chr4:24147441 9.05E-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01686 K09753 - csv:116401668 523.472