Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01722 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTTCTTCGGCTATTAATCTTAGGGAGGCAATTAACAATCGACCATCAGCCTCTGGCAGGGTGCCTTTTCAAGGTGTCGATGTTCTAGGGCTGAAGAAGCGAGGTCAGGGACTTAGATCTTGGATCCGAGTAGATTCCTCTGGGAATTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCACGTGATTTGCGTTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTAGTCAATCTAGAGCAGATTCGATGCATTATAACAGCTGATGAAGTTTTGCTTTTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTTGAGCTACAAAGACGATTAAAAGCCACTGGGGTTGATGAGGTCTGGCAGAATGATGCAAATCACGGTGCTGACTTAAACCGAAGAAGAGGAAGTAGGAATTTTGATAATGTATTTGTAAACACCTCTCCTGATTATCTGCCCTTTGAGTTCAGAGCTTTAGAAGTTGCTTTGGAGGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATCGAAGCATACCCATTGCTAGATGAACTCACATCAAAAATCAGTACATTGAATTTGGAGCGGGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAACTTATGGACGATGATGGAGATATGGCAGAAATGTATCTCACCGAGAAGAAAATGAGAATGGAGTCATTTGTTTATGGTGATCAGTCTGTGACTGGATACAGATCAATTGATGGAGCGTCAATTTCTGCTCCTGTTTCTCCTGTATCTTCACCACCCGAAACTCGTAGACTCGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAAAGCACGAGAAGTTCAGAAAGTACCAATGAAAATATAGAGGAGCTCGAAATGCTACTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAGGAGTACATTGACGACACAGAAGATTTCATCAACATCCAGTTGGATAATGTCCGTAATCAGTTGATCCAGTTTGAGCTACTGCTTACTACTGCAACATTTGTTGTTGCCATTTTTGGGGTGGTGGCGGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCTGATGCATTCAAGTGGGTCCTCCTAATTACAGGTGTAAGTGGAATTATCATATTTTCTGCATTTGTTTGGTTTTTCAGGTACAAAAGGCTGATGCCACTTTAA 1344 42.41 MADLKERLLPPKPSSAINLREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKATGVDEVWQNDANHGADLNRRRGSRNFDNVFVNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVTGYRSIDGASISAPVSPVSSPPETRRLEKSLSIARSRHESTRSSESTNENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPDAFKWVLLITGVSGIIIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24694241 24697686 + MELO3C026733.2.1 Cme04g01722 325983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01722 447 Gene3D - 41 124 - -
Cme04g01722 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 447 IPR039204 -
Cme04g01722 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cme04g01722 447 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 447 - -
Cme04g01722 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cme04g01722 447 MobiDBLite consensus disorder prediction 293 307 - -
Cme04g01722 447 MobiDBLite consensus disorder prediction 309 329 - -
Cme04g01722 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cme04g01722 447 MobiDBLite consensus disorder prediction 293 329 - -
Cme04g01722 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cme04g01722 447 Pfam CorA-like Mg2+ transporter protein 328 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cme04g01722 447 Coils Coil 228 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00132 Cme-Chr1:951607 Cme04g01722 Cme-Chr4:24694241 1.45E-119 dispersed
Cme03g01452 Cme-Chr3:23830675 Cme04g01722 Cme-Chr4:24694241 1.13E-59 dispersed
Cme03g01453 Cme-Chr3:23832133 Cme04g01722 Cme-Chr4:24694241 1.29E-37 dispersed
Cme04g01722 Cme-Chr4:24694241 Cme06g01215 Cme-Chr6:9770716 1.48E-98 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01722 K16075 - csv:101217419 813.142