Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g01731 | ATGCCCCTCGCCGCCCCCGTAGCTTCAGGTCAAACTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTCAAGCTTCTTCTTCAAAAGGGTTACATTGTTAGAGGCACCGTGAGAAACCCAGATGATCGAAAAAATGATCATTTGAAAGAGCTGGATGGAGCTGAGCAAAGGTTGACGCTGTACGGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCCGCCATTGACGGTTGCGATGGTGTTTTCCACACAGCGTCTCCGGTGACCGATGACCCAGTAAATGACAGAAACCAACCTTATTTCAGGATAATTGAAAAGGTGGAGCAGGCAGTACTTGGGACAAAAAATGTTATAATGGCGGCGGCAGAGGCCAAGGTCCGGCGAGTGGTGTTCACATCATCGATTGGAACTATTTACATGAACCCTAATCGTAGCCCCGACGCGGTGGTGGATGAGTCTTGTTGGAGTGATCTCGACTTTTGCAAAAATACTAAGAATTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAAAGGAGAAAGGGGTGGATCTAGTTGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAATCAATAAATGCAAGTGTTGCTCATATCATGAAGTACTTGACGGGCTCTGTCAAGACTTATGTCAATGCGGTTCAAGGGTATGTTCATGTTAAGGATGTTGCAAAAGCTCACTTGTTGGTGTATGAGACTCCTTCTGCCTTTGGTAGATACATTTGTGTTGAAACTATGCTTCATCGAGGAGAATTAGTTGACATTTTGGCTAAGTTCTTCCCCGAGTATCCCATCCCTACCAAGTAA | 864 | 45.83 | MPLAAPVASGQTVCVTGAGGFIASWLVKLLLQKGYIVRGTVRNPDDRKNDHLKELDGAEQRLTLYGADLLDFESLKAAIDGCDGVFHTASPVTDDPVNDRNQPYFRIIEKVEQAVLGTKNVIMAAAEAKVRRVVFTSSIGTIYMNPNRSPDAVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAKEKGVDLVVVNPMLVLGPLLQQSINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICVETMLHRGELVDILAKFFPEYPIPTK | 287 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 24876086 | 24881108 | - | MELO3C026746.2.1 | Cme04g01731 | 325992 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g01731 | 287 | CDD | FR_SDR_e | 13 | 287 | - | - | |
| Cme04g01731 | 287 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 8 | 286 | IPR036291 | - | |
| Cme04g01731 | 287 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 254 | IPR001509 | - | |
| Cme04g01731 | 287 | Gene3D | - | 5 | 287 | - | - | |
| Cme04g01731 | 287 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 7 | 287 | - | - | |
| Cme04g01731 | 287 | PANTHER | CINNAMOYL-COA REDUCTASE-LIKE PROTEIN | 7 | 287 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g01731 | Cme-Chr4:24876086 | Cme05g00170 | Cme-Chr5:1150440 | 9.64E-80 | dispersed | |
| Cme08g02415 | Cme-Chr8:31022375 | Cme04g01731 | Cme-Chr4:24876086 | 5.34E-07 | dispersed | |
| Cme04g01730 | Cme-Chr4:24865012 | Cme04g01731 | Cme-Chr4:24876086 | 1.72E-171 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g01731 | K09753 | - | csv:101219069 | 533.872 |