Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01751 ATGGAGAAGAAGACTTATCCCATAGGTGAAGAATTTTATATTCTATATGAAGAGGTTGGGCAGGGTGTGAGCGCTGCAGTTCACCGTGCTCTTTGTAAACCTCTTAATGAAATCGTCGCCATCAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCATCCGAATGTCCTTAAATCACACTGCTCCTTTGTCAATGGCCATAATTTGTGGATTGTTATGGCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGCTTTGAGGAGGTCGTGATAGCAACAGTATTGCGAGAAGTATTGAAGGGAGTTGAATATCTTCATAATCATGGACATATACATCGGGATATAAAAGCAGGGAATGTTCTTATTGATTCACGTGGTGCAATCAAGCTAGGAGATTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCAATGAAGGTACTGATGATGACCTTGCAAAATGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTTTCAAAGTCTTTCAAGCAGATGATTGCTAGTTGCTTGGTAAAGGATCCTTCAAAACGACCTTCTGCGAGTAAGCTGCTAAAGCATTCATTTTTTAAGCAAGCCCGGTCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTTGCACAAAAGAAAATGCCAGATGGAAAAAAGGAAGAATTATCACAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATCTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATTAGTGAAATCAATGAAGTAGGGAGCTCAAATTCATTGAATGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATATTGAAGAGAATGCCTTGCTCCGGAGACAACCCTCCATGAAAGCAAACGACACAGTAAATGGTAAAAAGTCTATCAATGAATCAACAATTATTGGTTCTTGCTCCCAACATCATTCTTCACCCCGCCATGATAATCAAACTGAGAATGGCTCCAGTGAAGAGGTTAATTTGGAGAGCAGCAGAAGAATTATGGGGAATACTCCTAATACTATCCAACATAAAAGAAGTATTTCTTCTAATACCTGTATTCAACAAGAAGTCGGTGTGCCTCTGAACAGAAGAGAGAGTTACGAGACAGAAAAGAATGGTGCAAATGGAAGTCCTGCAACGGGAATGACTTCCCAGGCGGTAGATGATGTACTTTCTGATTCTCATTCTAAAGATCCCAAGTCATCATCAAGTCCAGCAATAATTGAAGAGGATCAGGATGAGAAAGCGAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCAGAGAGTGTCGATTTAGAAAAGGCAGCAGCATCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTTTGAG 1722 41.0 MEKKTYPIGEEFYILYEEVGQGVSAAVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMAYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNVLIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEINEVGSSNSLNALDVQEKKLQGQNSSEISDIEENALLRRQPSMKANDTVNGKKSINESTIIGSCSQHHSSPRHDNQTENGSSEEVNLESSRRIMGNTPNTIQHKRSISSNTCIQQEVGVPLNRRESYETEKNGANGSPATGMTSQAVDDVLSDSHSKDPKSSSSPAIIEEDQDEKAKAPVIQQKGRFKVTSESVDLEKAAASPILQKSHSMQVGNFE 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25101881 25107577 - MELO3C024882.2.1 Cme04g01751 326012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01751 574 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01751 574 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01751 574 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 570 - -
Cme04g01751 574 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 570 - -
Cme04g01751 574 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Cme04g01751 574 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cme04g01751 574 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01751 574 MobiDBLite consensus disorder prediction 488 507 - -
Cme04g01751 574 SUPERFAMILY Protein kinase-like (PK-like) 13 275 IPR011009 -
Cme04g01751 574 CDD STKc_OSR1_SPAK 13 274 - -
Cme04g01751 574 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Cme04g01751 574 MobiDBLite consensus disorder prediction 420 551 - -
Cme04g01751 574 MobiDBLite consensus disorder prediction 437 474 - -
Cme04g01751 574 MobiDBLite consensus disorder prediction 524 538 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01751 Cme-Chr4:25101881 Cme09g00387 Cme-Chr9:3475453 0 dispersed
Cme04g01751 Cme-Chr4:25101881 Cme06g00521 Cme-Chr6:3294460 1.58E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64821 PF00069 Pkinase 9.60E-59 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01751 K08835 - csv:101211076 1080.86