Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01845 AAGGCGGAGGCCAATAACAAAGCAATTCAGCAACCCGAATTTCTCGATTCGGCGCGCAGTGGGACATGCTCGAATCTTAGCGACCAAATTTATCGGAGAAAAAACGATTTTGGGGAATTTTTGAAGAGGTTTTTTCGATTGTGGTGTAGAAATTGTTCGAAAATGGCGGGTCTTGAGGAACTCAAGAAGAAACTTACTCCATTGTTTGATGCTGAAAAGGGGCTTTCGATGGACTCCCCTGTGGACCCGTCTGATTCTTATACGCTAATGGATGAATTAACGCAGTATCATAGTAAAAGGTCTTATGTTCAGACTCACATTGATAGTTTGCGTTACTTAAATGAATTTTCTGACAATGGGACCGTAAATTTGCTAAGCCGATCATATGGGGTTTATAATTTCAATGAGCTAGGGTTACAAAAATGCACATCATGGCTGGCCGATGATTCGGGGAGCAGTGAGAGGACATATCGATGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATCGGTAGTGGTGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCATCGAATCATGGCACTAAAGAAGATTAATATCTTTGAAAAGGAGAAAAGACAGCAGCTTCTTACCGAAATACGGACACTATGCGAAGCACCCTGTTCTGAGGGTCTTGTGGAGTTTCATGGAGCATTTTATACCCCTGATTCTGGGCAAATAAGCATCGCTTTGGAATACATGGATGGAGGGTCATTGGCAGATGTCCTGCGTTTGAAAAAATGTATACCTGAGCCTGTCCTTTCTACTATGTTTCAGAAGCTTCTTCAAGGTTTAAGTTACCTGCATGGAGTAAGACATTTGGTTCACAGAGATATAAAGCCAGCTAATTTACTTGTAAATCTAAAGGGTGAAGCAAAGATTACGGATTTTGGCATAAGTGCTGGCTTAGAGAACTCAATGGCAATGTGTGCTACTTTCGTTGGAACTGTCACATACATGTCACCTGAGCGAATTCGAAACGAGAGCTATTCTTATCCAGCTGACATTTGGAGCCTTGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTTATGTTACAGATTTTGGATGACCCGTCTCCATTGCCGTCGAAACATAAGTTTTCGTCTGAGTTTTGCTCGTTTGTGGATGCCTGCTTGCAGAAAGATGCAGATGCTAGGCCAACAGCAGAGCAGCTGCTTTCACACCCATTTATCAAAAAATATGAGAATGAACAAGTAGACTTAGCAGCATTTGTCCAGAATGTGTTTGATCCAATACAGAGGATGAAGGACTTGGCAGATATGTTGACAATTCATTATTACTTGCTTTTTGATGGACCTGATGACTTCTGGCACCATACAAAAGCTTTATACCATGAAAGCTCAACTTTAAGTTTCTCAGGGAAGCAATTTTCTGGTCCAATTGATATCTTTGGAAAACTATCAGAGATTCGAAGTACATTAGCAGGAGATTGGCCTCTTGAAAAACTAGTTCACGTTGTCGAAAAACTCCAATGTCGAGCCCACGGTCGGGATGGAGTTGCCATAAGGGTGTCAGGATCCTTCATCCTTGGGAACCAGTTCCTCATATGTGGAGACGGTGTACAAGTAGAAGGACTGCCAAATTTTAAGGATCTCTCCATTGACATGGAAAGCAAGAAAATGGGATCCTTCCGGGAGCAGTTCATCATCGAGCCAAGCAATCTCATCGGTCGTTATTTCATTGCTAACCAAGAGCTTTATATAATCCAATAG 1800 42.39 KAEANNKAIQQPEFLDSARSGTCSNLSDQIYRRKNDFGEFLKRFFRLWCRNCSKMAGLEELKKKLTPLFDAEKGLSMDSPVDPSDSYTLMDELTQYHSKRSYVQTHIDSLRYLNEFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLADDSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSTMFQKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPLPSKHKFSSEFCSFVDACLQKDADARPTAEQLLSHPFIKKYENEQVDLAAFVQNVFDPIQRMKDLADMLTIHYYLLFDGPDDFWHHTKALYHESSTLSFSGKQFSGPIDIFGKLSEIRSTLAGDWPLEKLVHVVEKLQCRAHGRDGVAIRVSGSFILGNQFLICGDGVQVEGLPNFKDLSIDMESKKMGSFREQFIIEPSNLIGRYFIANQELYIIQ 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26201523 26207000 - MELO3C026577.2.1 Cme04g01845 326106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01845 599 Gene3D Transferase(Phosphotransferase) domain 1 241 443 - -
Cme04g01845 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Cme04g01845 599 SUPERFAMILY NTF2-like 445 597 IPR032710 -
Cme04g01845 599 SMART serkin_6 164 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01845 599 ProSitePatterns Protein kinases ATP-binding region signature. 170 193 IPR017441 GO:0005524
Cme04g01845 599 PANTHER - 56 598 - -
Cme04g01845 599 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 56 598 - -
Cme04g01845 599 Gene3D Phosphorylase Kinase; domain 1 140 240 - -
Cme04g01845 599 ProSiteProfiles Protein kinase domain profile. 164 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01845 599 Pfam Protein kinase domain 168 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g01845 599 CDD PKc_MAPKK_plant_like 165 425 - -
Cme04g01845 599 SUPERFAMILY Protein kinase-like (PK-like) 166 450 IPR011009 -
Cme04g01845 599 Gene3D - 444 598 - -
Cme04g01845 599 ProSiteProfiles Nuclear transport factor 2 domain profile. 447 597 IPR018222 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00272 Cme-Chr2:2283734 Cme04g01845 Cme-Chr4:26201523 5.87E-72 dispersed
Cme04g01845 Cme-Chr4:26201523 Cme05g02012 Cme-Chr5:28599809 4.28E-78 dispersed
Cme04g01845 Cme-Chr4:26201523 Cme05g02055 Cme-Chr5:28855837 7.23E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64827 PF00069 Pkinase 2.20E-59 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01845 K20607 - csv:101217978 1016.91