Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g01904 | ATGTTCTTGGCTATTACACATCCACTTGGCCCCTCCCCCATGTCACTTGCACCAACCCCAATTATATCTCCATTCCTCCTAAACTTCTCGTTTCTTTCCTCTTCCTCCTCTCTCCATCAACCTTCAATCTCTCTCTCTCTATCTCTATCTCGCGCACGCACACACATTTCTCGCCGGGGAACTCGACAAAACCCCCGGAATCCGCCATGGAAGATGGATAGATTCATCCAGTCGCCGGCGTCCAAATTCCGCCCCTTTCGGCGACAGCTAATCGGCTCGTCCTCCGATTCGGCCACCAGCGCGGCGGCCGCTACGGACGAACACCCAAATTACATCCTCCTCCGCTACCAAATCCTCGACCCTGATAGCGACATTGTAGCACAATGGAACCGCGTATTCCTAGTGACATGCCTGATCGCTCTTTTCATCGATCCGCTGTATTTCTACACGTCGTCTGTGGGAGGGCCGGCATGCCTGACCTCGGAGGTGAATCTGGGAGTGGCGATCACGTTCTTCAGAACGGTAACCGATCTGTTCTTCTTGTTGCACATGGTGTTGAAGTTTCGAACGGCATATGTTGCTCCAAGCTCTAGGGTTTTTGGAAGAGGAGAGCTGGTTATGGATGCCAAAGCCATTGCTACGCGCTATTTGAAATCTGATTTTGTGATTGATCTTGCCGCTACTCTCCCCCTCCCACAAATAGTGATGTGGTTGGTGATTCCAATAACAAGAAACTCAAGAGTGGATCATGCCAACAACACAATCGCTCTCCTTGTTCTTCTTCAATACGTTCCACGGTTGTTCCTCATCTTCCCTCTCAACCAACGCATCATCAAAACAACTGGTGTTGTTGCCAAAACTGCATGGGCTGGTGCTGCCTACAATCTCATCCTCTACATGCTTGCTAGTCATGTTTTGGGATCTACATGGTATTTGTTGTCCATAGGGAGACAGTTTTCATGTTGGAAATCAGAATGTGCAAAGGAAAATGCCTCCCAAGTTCTAACATGCCTTCCCATCTTCTTGGACTGTACCAGTTTGAATGACACTTTAAGACAATATTGGCTTAATGTCACTCAAGTTACTTCCAAATGTGATCCAAGGAACGAAAACATTAAGTTCAAGTTTGGAATGTTCTCAGATGCTTTCACCAATGATGTTGCCTCCTCCCATTTCTTTGCAAAGTACTTTTATTGTCTTTGGTGGGGCCTCAGAAATTTAAGTTCATATGGCCAAACTTTGGATACAACAACTTACATTGGGGAGACATTATTTTGCATATCAACATGCATATTTGGGTTGATATTATTTTCACAACTCATTGGCAACATGCAGACATATTTGCAATCCATGACAGTAAGACTTGAAGAATGGAGGATAAAGAGAAGAGACACTGAAGAATGGATGAGACGTCGTCAGTTACCACCAGATTTGCAAGAACGAGTTCGCCGATTCGTTCAATATAAATGGCTGGCCACGAGAGGGGTTAATGAAGAATCCATTTTACGTTCACTACCTATCGACCTTCGTCGTGAGATTCAACAACATTTGTGTTTGTCACTCGTTCGTCGTGTGCCTTTCTTCTCACAAATGGATGATCAACTTCTTGATGCCATATGTGAGCGTCTCGTCTCATCCTTGTGTACTCAAGGAACGTACATTGTGCGAGAAGATGATCCAGTTAATGAAATGTTGTTTATTATAAGAGGACAACTAGAGAGCTCAACGACCAATGGCGGTCGATCTGGCTTTTTCAACTCCATTACACTAAAACCAGGTGATTTTTGTGGTGAAGAACTATTGACATGGGCTTTGATGCCAAGTTCTAGTTTGAACATGCCTTCTTCTACTCGAACCGTCAGAGCACTTACCGAAGTTGAAGCGTTTGCTCTTCGAGCTGAGGATCTCAAGTTCGTTGCCGGACAATTCAAACGCCTGCATAGCAAGAAACTACAACATGCCTTTAGGTATTATTCCCATCAATGGAGAACATGGGGTGCTTGTTTAATTCAAGTAGCTTGGAGGAGGCTTCAGAAGAGAAAATTGGCAAAGAGATCAACAGCATACAGAGACAGCTTGAGTTCCTATGCAGATTCAATGCAACAAGATAACGAATACGATATCGAGCTAGCAGAAGAAAATTACGACGATGACAGTGACAACACCATTGAAGATGAAGACGACATGTCTTCTGCAGACTACATGAACAAAACACAACATCTAGGGGCAACAATTTTGGCTTCAAAGTTTGCTGCCAACACTAGAAGAGGAGTTAATCAAAAGGGTCAAACATCCAAACCTTCAAGTTTGAAAATGCCAAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGGATGGATGA | 2364 | 44.33 | MFLAITHPLGPSPMSLAPTPIISPFLLNFSFLSSSSSLHQPSISLSLSLSRARTHISRRGTRQNPRNPPWKMDRFIQSPASKFRPFRRQLIGSSSDSATSAAAATDEHPNYILLRYQILDPDSDIVAQWNRVFLVTCLIALFIDPLYFYTSSVGGPACLTSEVNLGVAITFFRTVTDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDAKAIATRYLKSDFVIDLAATLPLPQIVMWLVIPITRNSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYMLASHVLGSTWYLLSIGRQFSCWKSECAKENASQVLTCLPIFLDCTSLNDTLRQYWLNVTQVTSKCDPRNENIKFKFGMFSDAFTNDVASSHFFAKYFYCLWWGLRNLSSYGQTLDTTTYIGETLFCISTCIFGLILFSQLIGNMQTYLQSMTVRLEEWRIKRRDTEEWMRRRQLPPDLQERVRRFVQYKWLATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNMPSSTRTVRALTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGACLIQVAWRRLQKRKLAKRSTAYRDSLSSYADSMQQDNEYDIELAEENYDDDSDNTIEDEDDMSSADYMNKTQHLGATILASKFAANTRRGVNQKGQTSKPSSLKMPKLFKPDEPDFSMDG | 787 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26747348 | 26751438 | - | MELO3C009944.2.1 | Cme04g01904 | 326165 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g01904 | 787 | MobiDBLite | consensus disorder prediction | 773 | 787 | - | - | |
Cme04g01904 | 787 | Pfam | Ion transport protein | 129 | 454 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cme04g01904 | 787 | Gene3D | Helix hairpin bin | 454 | 518 | - | - | |
Cme04g01904 | 787 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 | 107 | 785 | - | - | |
Cme04g01904 | 787 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 107 | 785 | - | - | |
Cme04g01904 | 787 | CDD | CAP_ED | 527 | 658 | IPR000595 | - | |
Cme04g01904 | 787 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 527 | 657 | IPR000595 | - | |
Cme04g01904 | 787 | SUPERFAMILY | Voltage-gated potassium channels | 120 | 449 | - | - | |
Cme04g01904 | 787 | Gene3D | Jelly Rolls | 525 | 645 | IPR014710 | - | |
Cme04g01904 | 787 | MobiDBLite | consensus disorder prediction | 754 | 770 | - | - | |
Cme04g01904 | 787 | Pfam | Cyclic nucleotide-binding domain | 550 | 637 | IPR000595 | - | |
Cme04g01904 | 787 | MobiDBLite | consensus disorder prediction | 754 | 787 | - | - | |
Cme04g01904 | 787 | SUPERFAMILY | cAMP-binding domain-like | 457 | 652 | IPR018490 | - | |
Cme04g01904 | 787 | Gene3D | - | 132 | 452 | - | - | |
Cme04g01904 | 787 | SMART | cnmp_10 | 527 | 658 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01904 | Cme-Chr4:26747348 | Cme05g01491 | Cme-Chr5:24333092 | 0 | dispersed | |
Cme02g01001 | Cme-Chr2:14966992 | Cme04g01904 | Cme-Chr4:26747348 | 0 | transposed | |
Cme04g00327 | Cme-Chr4:2616233 | Cme04g01904 | Cme-Chr4:26747348 | 0 | transposed | |
Cme06g02074 | Cme-Chr6:26030983 | Cme04g01904 | Cme-Chr4:26747348 | 1.16E-117 | transposed | |
Cme08g02307 | Cme-Chr8:30063052 | Cme04g01904 | Cme-Chr4:26747348 | 0 | transposed | |
Cme11g01806 | Cme-Chr11:26249176 | Cme04g01904 | Cme-Chr4:26747348 | 0 | transposed | |
Cme02g01958 | Cme-Chr2:25852405 | Cme04g01904 | Cme-Chr4:26747348 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g01904 | K05391 | - | csv:101216651 | 1445.25 |