Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01908 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTAGCTTATCAGAGCTTGGGGGTTGTTTATGGAGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTCAACACTCTGAAACCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTCTTCTGGACTCTCACGCTCATTCCTTTGATTAAGTATGTATTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGGGGAACTTTCGCTTTATACTCATTGCTCTGTCGCCATGCTCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGGTGGATTTAACCAACAAGAAGACTTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTCCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTTCAATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCCATGGCTAAACCACACCATCGCTATGTTGAAGTCCCGGTTGCTTGTGCCATATTGGTTATCCTGTTTGCAATTCAACATTATGGAACCCATCGAGTTGGGTTTCTATTTGCACCAGTTGTGATTACATGGCTTCTGTGTATCAGTGCCATAGGGCTGTACAATATCTTCTACTGGAATCCGCATGTTTACCGAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGAATCCTGCTATGTATGACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCACAGCTATCCATTAAGATTGCTTTCTCTTTCGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTCTCTCAACATCACGGCGAGGAAAGTAACTACCGAATTGGATTTTATGCGTCTGTTCCTGAGAAGTTAAGATTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGGACTTTTTCGATAATAAAACAGTGCTCCTCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCGGAGATCAATTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACAAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACTACCTGCTTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGCTTTGTCTATGCCATTGCCTTCATACTCATTTTCGGGTCCATCGAATCACTCTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCGATCGCCCTCTCACTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACATGCAAAAAATACGAGTTTGATGTTCAAAACAAAGTGTCCATCAACTGGCTCCTAGGCCTAGGTCCCAGTTTAGGCATTGTGAGAGTACGTGGGATTGGCCTCATATACACCGAACTCGTCGCAGGAATCCCCGCTATCTTCTCCCACTTCGTAACAAACCTCCCTGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCAGTCCCGCACGTGAGACCTGGAGAAAGGTTCCTAGTAGGCAGAGTTGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCACGATACGGCTACCGTGACATCCACAAGGACGACTTGGAGTTTGAGAAGGACTTGGTATGCAGCATTGCAGAGTTCATCCGTTCCGAGAAATCAGAAACCAGTGTAAAGCTAGAAGATGCAGAAGAAAGTGAGAGAATGACAGTAGTAGGGACATCTTCAACAAATGTAGATGGAGTGAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGTAAGAGAGATAAAATCACCAAAAAAACTGAGGAAAAGAGTGAGATTTCTTGTACCAGAGAGCCCACAAATGGAAATGGAAGCAAGAAGAGAGCTTCAAGAGCTAATGGAAGCTAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGGGGATCAGGTTGGGTGAAGACAGCGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGGTGGGAATGGTCTACCAAGTTTGA 2319 44.42 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVDLTNKKTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPSISVFSAVSGLELSMAKPHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGEESNYRIGFYASVPEKLRLPVLVIAILAAVVGSQAVITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFVYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTCKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVAGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDLEFEKDLVCSIAEFIRSEKSETSVKLEDAEESERMTVVGTSSTNVDGVRMCEDEGETAETSEVREIKSPKKLRKRVRFLVPESPQMEMEARRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKTAVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMVYQV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26778147 26783475 + MELO3C009941.2.1 Cme04g01908 326169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01908 772 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme04g01908 772 PANTHER POTASSIUM TRANSPORTER 6 1 772 - -
Cme04g01908 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme04g01908 772 TIGRFAM kup: potassium uptake protein 23 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g01908 Cme09g00365 CCT
Cme04g01908 Cme09g00365 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01908 Cme-Chr4:26778147 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme06g01960 Cme-Chr6:23800564 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme07g01163 Cme-Chr7:15422628 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme07g02006 Cme-Chr7:25134135 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme10g01233 Cme-Chr10:12843721 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme10g01737 Cme-Chr10:24470807 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme12g00060 Cme-Chr12:594523 Cme04g01908 Cme-Chr4:26778147 0 transposed
Cme10g00509 Cme-Chr10:3288116 Cme04g01908 Cme-Chr4:26778147 0 wgd
Cme04g01908 Cme-Chr4:26778147 Cme09g00365 Cme-Chr9:3119634 3.16E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01908 K03549 - csv:101211664 1491.09