Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g01911 | ATGATTGCCGCCGAGTGCGCGACCGTCGGCTCAAACACCGTCTACAAAGCCATTTCCGGCCACCAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTCCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGAGTTTTTCCGTCCGAGAAGTTGTCGTTCTTGTTAAGATTGATTAGCTTATCAGCGATGGGAGTTGGATGTCAACTATTTTCGTATAAAGGATTGGAGTATAGTTCGCCAACGCTTGCTTCCGCCATTAGTAATCTAATTCCAGCTCTTACTTTCATCTTGGCCGTTCTCTTCGGGATGGAGAAAGTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAGATCGTTGGCTCAACGGTCTCCATAACAGGTGCACTTGTAGTGGTTCTTTATAAAGGTCCAATCATTCTACCAAACCTATTTTCTAGTCCAACAAGATTGAATCTTCCTCCTCCTCCCTTGGGCTCTTCCCAACCAAATTGGATTTTGGGTGGCCTCTGCTTTTTTGTTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACATTGAATATGTATCCAGATGAACTAGTTGTGGTGTGTTTATTCTATGTTTTCGAGGTTATAATAGCTGCACCAATATGCCTATTAGCAGAAAGAAACATGAGTGCTTGGAAGCTGAAAAATAGTATGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTAGGTCAATCCTTTGTCTCTGCAATCCATACATGGGGTGTACATGTGAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATAGCCATTGCTGCTGCTACAGGTGTTATTTTCCTTGGGGATGATCTTCATCTTGGAAGTATAATTGGAGCAACGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATTAAAGAAGAGGACTTGAAGGGACAGGATGATTTCTCAAACTTGGAATCTTCATCCAAAGATAAAGTTCCATTGTTGAAAAGCTGTAAAGTTCAAGCTGACTAA | 1044 | 42.72 | MIAAECATVGSNTVYKAISGHQISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSEKLSFLLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKVALRSSSSIAKIVGSTVSITGALVVVLYKGPIILPNLFSSPTRLNLPPPPLGSSQPNWILGGLCFFVQYLLNSFWYIVLTQTLNMYPDELVVVCLFYVFEVIIAAPICLLAERNMSAWKLKNSMEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGATIIASGFYSIMWGKIKEEDLKGQDDFSNLESSSKDKVPLLKSCKVQAD | 347 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 26800327 | 26814203 | + | MELO3C009937.2.1 | Cme04g01911 | 326172 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g01911 | 347 | PANTHER | WAT1-RELATED PROTEIN | 2 | 319 | - | - | |
| Cme04g01911 | 347 | PANTHER | WAT1-RELATED PROTEIN | 2 | 319 | IPR030184 | GO:0016021|GO:0022857 | |
| Cme04g01911 | 347 | Pfam | EamA-like transporter family | 6 | 137 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme04g01911 | 347 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 214 | 315 | - | - | |
| Cme04g01911 | 347 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 31 | 140 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cme04g01911 | Cme09g00341 | CCT | |
| Cme04g01911 | Cme09g00341 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g01911 | Cme-Chr4:26800327 | Cme04g01914 | Cme-Chr4:26822063 | 1.74E-126 | dispersed | |
| Cme04g01915 | Cme-Chr4:26828030 | Cme04g01911 | Cme-Chr4:26800327 | 2.62E-11 | dispersed | |
| Cme04g01911 | Cme-Chr4:26800327 | Cme04g01912 | Cme-Chr4:26815909 | 2.71E-63 | tandem | |
| Cme10g00503 | Cme-Chr10:3223958 | Cme04g01911 | Cme-Chr4:26800327 | 5.59E-48 | wgd | |
| Cme04g01911 | Cme-Chr4:26800327 | Cme09g00340 | Cme-Chr9:2897049 | 9.43E-96 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g01911 | - | - | csv:101211416 | 644.81 |