Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01911 ATGATTGCCGCCGAGTGCGCGACCGTCGGCTCAAACACCGTCTACAAAGCCATTTCCGGCCACCAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTCCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGAGTTTTTCCGTCCGAGAAGTTGTCGTTCTTGTTAAGATTGATTAGCTTATCAGCGATGGGAGTTGGATGTCAACTATTTTCGTATAAAGGATTGGAGTATAGTTCGCCAACGCTTGCTTCCGCCATTAGTAATCTAATTCCAGCTCTTACTTTCATCTTGGCCGTTCTCTTCGGGATGGAGAAAGTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAGATCGTTGGCTCAACGGTCTCCATAACAGGTGCACTTGTAGTGGTTCTTTATAAAGGTCCAATCATTCTACCAAACCTATTTTCTAGTCCAACAAGATTGAATCTTCCTCCTCCTCCCTTGGGCTCTTCCCAACCAAATTGGATTTTGGGTGGCCTCTGCTTTTTTGTTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACATTGAATATGTATCCAGATGAACTAGTTGTGGTGTGTTTATTCTATGTTTTCGAGGTTATAATAGCTGCACCAATATGCCTATTAGCAGAAAGAAACATGAGTGCTTGGAAGCTGAAAAATAGTATGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTAGGTCAATCCTTTGTCTCTGCAATCCATACATGGGGTGTACATGTGAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATAGCCATTGCTGCTGCTACAGGTGTTATTTTCCTTGGGGATGATCTTCATCTTGGAAGTATAATTGGAGCAACGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATTAAAGAAGAGGACTTGAAGGGACAGGATGATTTCTCAAACTTGGAATCTTCATCCAAAGATAAAGTTCCATTGTTGAAAAGCTGTAAAGTTCAAGCTGACTAA 1044 42.72 MIAAECATVGSNTVYKAISGHQISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSEKLSFLLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKVALRSSSSIAKIVGSTVSITGALVVVLYKGPIILPNLFSSPTRLNLPPPPLGSSQPNWILGGLCFFVQYLLNSFWYIVLTQTLNMYPDELVVVCLFYVFEVIIAAPICLLAERNMSAWKLKNSMEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGATIIASGFYSIMWGKIKEEDLKGQDDFSNLESSSKDKVPLLKSCKVQAD 347
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 26800327 26814203 + MELO3C009937.2.1 Cme04g01911 326172
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01911 347 PANTHER WAT1-RELATED PROTEIN 2 319 - -
Cme04g01911 347 PANTHER WAT1-RELATED PROTEIN 2 319 IPR030184 GO:0016021|GO:0022857
Cme04g01911 347 Pfam EamA-like transporter family 6 137 IPR000620 GO:0016020|GO:0016021
Cme04g01911 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 315 - -
Cme04g01911 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 140 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cme04g01911 Cme09g00341 CCT
Cme04g01911 Cme09g00341 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01911 Cme-Chr4:26800327 Cme04g01914 Cme-Chr4:26822063 1.74E-126 dispersed
Cme04g01915 Cme-Chr4:26828030 Cme04g01911 Cme-Chr4:26800327 2.62E-11 dispersed
Cme04g01911 Cme-Chr4:26800327 Cme04g01912 Cme-Chr4:26815909 2.71E-63 tandem
Cme10g00503 Cme-Chr10:3223958 Cme04g01911 Cme-Chr4:26800327 5.59E-48 wgd
Cme04g01911 Cme-Chr4:26800327 Cme09g00340 Cme-Chr9:2897049 9.43E-96 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01911 - - csv:101211416 644.81