Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01912 ATGGTTAAGGCGGAGTGCGCCACCGTCGGCTCCAACACCGGCTTCAAAGCCGCCACAGCTCGAGGCCTCAGCTACTATGTCTTCACCCTCTACGTTTGCATCGTCGCGGCCGCCGCCCTCATCCCTTTCGCCTTATTCTTCCATAAGTCCGCAGAGCTTCCTCCCAACAAGATTTTCTTCTTTTTCCAGATCGTTTGCCTCTCTGCACTCGGGCTTTCTTGTCAGTTGCTTGGAAACAAAGGACTTGAGTATAGCTCACCAACTCTTTCATCCGCCATTAGCAACTTAATTCCAGCTTTCACTTTCATGTTGGCTGTCTCTTTTAGGATGGAGAAGATAGATTTGAAGAGAAGCAGCAGCATAGTGAAAATAGTTGGGTCAGCAGTGTCCATATCAGGTGCTTTGGTAGTGGTTTTGTACAAAGGCCCAATTGTGATATCAAACCCATATTCTCCCCGCCCAAAACAATTGGGCCTTCTCTATCCAAATCCCCCTTTGGACTCTTCACATCCTCAGCCCAATTAG 525 48.57 MVKAECATVGSNTGFKAATARGLSYYVFTLYVCIVAAAALIPFALFFHKSAELPPNKIFFFFQIVCLSALGLSCQLLGNKGLEYSSPTLSSAISNLIPAFTFMLAVSFRMEKIDLKRSSSIVKIVGSAVSISGALVVVLYKGPIVISNPYSPRPKQLGLLYPNPPLDSSHPQPN 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26815909 26820269 + MELO3C009935.2.1 Cme04g01912 326173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01912 174 PANTHER WAT1-RELATED PROTEIN 2 156 IPR030184 GO:0016021|GO:0022857
Cme04g01912 174 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 140 - -
Cme04g01912 174 Pfam EamA-like transporter family 15 131 IPR000620 GO:0016020|GO:0016021
Cme04g01912 174 PANTHER WAT1-RELATED PROTEIN 2 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01912 Cme-Chr4:26815909 Cme04g01914 Cme-Chr4:26822063 4.71E-119 dispersed
Cme04g01911 Cme-Chr4:26800327 Cme04g01912 Cme-Chr4:26815909 2.71E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01912 - - cmo:103487122 340.502