Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01925 CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCATCTTCTTCACTTCACTCCAAAGCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTAGAGAGAGAGAGAGAGACAGAGAGTTAACGATGGAGATTCTGAAGCTTCTCTTCATTCTTCTCTCAACGGCTTCGTTTTATTCTCTATCAGAATCCCTTCCTCTCACCGCGAATTACTACCAGAAATCCTGCCCCAGATTCAGTCAGATTATCCAAGATACAGTCACCAACAAACAGATCACTAGCCCTTCCACCGCCGCTGGAACTCTTCGTCTCTTCCTCCACGACTGTCTTCCCAACGGCTGCGACGGCTCCGTCCTCATCTCCTCCACTCCTTTCAACAAAGCCGAGCGCGATGCTGACATCAACCTCTCTCTCCCAGGCGACGCCTTCGATGTTATCGTTCGAGCCAAGACCGCTCTCGAGCTCGCATGTCCCAACACTGTCTCTTGTGCCGACATTCTCGCTGTTGCCACTCGTGACCTCGTCACCATGGTTGGCGGACCTTACTACAATGTTCTCCTTGGTCGTAGAGATGGGCGTGTGTCTAAAGCTTCGACGATTCCTGGTTCTTTACCGAAAGCTACCTCGCCGATTCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTGTGCAGGAAATGGTAGCGTTATGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGTTCTCAGATCTATAATTATAGCAAGTCGTCTTCGTATGATACGCAGTATAACCCTAGATTCGCGCAAGGGTTGCAAAAGGCTTGTTCTGGTTATGACAAGAATCCTACATTGTCGGTTTTCAATGACATTATGACTCCCAACAAATTTGATAACTCTTACTTCCAGAATCTGCCGAAGGGATTGGGGATCTTGAAGTCTGATCATGGGTTGTATAATGATTGGAGGACGAGGCCATTCGTGGAGGCGTATGCGGCGGATGAGAAAAAGTTCTTCAATGATTTTGCTCGAGCGATGGAAAAGTTGAGTAATTATAAAGTTGTGACAGGGAATCAAGGGGAGATTAGGCATAAGTGTGATGCGATTAATTGA 1107 45.98 LLLLLLLLLLRHLLHFTPKPFFFFFFFFFFFFRERERDRELTMEILKLLFILLSTASFYSLSESLPLTANYYQKSCPRFSQIIQDTVTNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGSLPKATSPIPQIIDIFKARGFTVQEMVALCGAHTIGFSHCKEFSSQIYNYSKSSSYDTQYNPRFAQGLQKACSGYDKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYNDWRTRPFVEAYAADEKKFFNDFARAMEKLSNYKVVTGNQGEIRHKCDAIN 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26977901 26979413 + MELO3C009924.2.1 Cme04g01925 326186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01925 368 ProSiteProfiles Plant heme peroxidase family profile. 66 368 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PANTHER - 47 368 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 Gene3D Peroxidase, domain 2 205 347 - -
Cme04g01925 368 Gene3D - 70 368 - -
Cme04g01925 368 Pfam Peroxidase 88 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PANTHER PEROXIDASE 31 47 368 - -
Cme04g01925 368 PRINTS Haem peroxidase superfamily signature 161 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Haem peroxidase superfamily signature 98 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Haem peroxidase superfamily signature 179 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Haem peroxidase superfamily signature 288 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 302 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 100 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 160 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 286 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 226 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 76 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 141 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 PRINTS Plant peroxidase signature 342 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 SUPERFAMILY Heme-dependent peroxidases 67 368 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme04g01925 368 CDD secretory_peroxidase 67 367 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01925 Cme-Chr4:26977901 Cme08g00634 Cme-Chr8:4094550 1.80E-90 dispersed
Cme01g01269 Cme-Chr1:16035569 Cme04g01925 Cme-Chr4:26977901 4.96E-18 transposed
Cme12g00272 Cme-Chr12:3151422 Cme04g01925 Cme-Chr4:26977901 4.20E-18 transposed
Cme12g01717 Cme-Chr12:23962345 Cme04g01925 Cme-Chr4:26977901 1.63E-143 wgd
Cme02g01940 Cme-Chr2:25736686 Cme04g01925 Cme-Chr4:26977901 5.20E-133 wgd
Cme04g01925 Cme-Chr4:26977901 Cme09g00334 Cme-Chr9:2836544 1.26E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01925 K00430 - csv:101219829 642.499