Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01986 ATGTTTCCAGCATTCTCGAAGAGTTGTAGAGAAATGGTTAACAAATGGGAAAACATGATTAGTGAAGAAGGAAGAAGTGAAATAGATGTGTGGCCTGACTTACAAAACATGGCTGCTGATGTGATTTCTAGAACTGCATTTGGAAGTAGTTATGAAGAAGGAAAAAAAATCTTCCTGCTCTTGAAAGAGGCAGCTTCGCTATCCACTACATACCTAACAAACAGAATCTATTTCATCCCAGGGTTTAGGTATATACCAACTAAATTAAACAAGAGGATGCGAGAGACTGATAGGAAAATACGAGATATGGTTTTGAGTATTATAAACAAAAGACAAAATGCTATGGAGAAAGGTGAAGCTTCAAATAATGAAGATCTTATAGGGATCCTATTAGAATCAAATGCAAGTCAAATTGAAGAAGACCAAAACAAGAAAGAAGTTGGAATGAGCATAGAAGAAGTAATTAATGAATGCAGGCTTTTCTATTTTGCTGGTCAAGAAACCACAGCTGCATTGCTTACTTGGACAATGATTCTACTTGGTCGATACTCGGAATGGCAAGATCGAGCGAGAGCAGAAGTCTTGGAGGTTTTTGGTGATAACAAGAACTTGGATTTTGATCCTCTAAGTCATCTAAAAATAGTAAGCATGGTCCTGAATGAAGTTCTTAGACTGTACCCTCCGGTTGGAATGTTAGCTCGAGAGATTCAAAATGAAACAAAATTGGGGAATTTGACATTACCAAGTGGAGTGTCAATAGGAATACCAATCTTAAGTATGCACCAAAATCCCAAAATATGGGGTGAAGATGCAATTGAGTTTAACCCAGGAAGATTTTCAGAAGGAATCTCGAAAGCAACAAAGAATCAAGTATGTTATATTCCTTTTGGATGGGGTCCTCGTATTTGCATTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCGATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCACAAATATCACTATTCAGCCACAACATGGAGCTCATCTCATCCTTCGTAAACTATAA 1068 36.89 MFPAFSKSCREMVNKWENMISEEGRSEIDVWPDLQNMAADVISRTAFGSSYEEGKKIFLLLKEAASLSTTYLTNRIYFIPGFRYIPTKLNKRMRETDRKIRDMVLSIINKRQNAMEKGEASNNEDLIGILLESNASQIEEDQNKKEVGMSIEEVINECRLFYFAGQETTAALLTWTMILLGRYSEWQDRARAEVLEVFGDNKNLDFDPLSHLKIVSMVLNEVLRLYPPVGMLAREIQNETKLGNLTLPSGVSIGIPILSMHQNPKIWGEDAIEFNPGRFSEGISKATKNQVCYIPFGWGPRICIGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPITNITIQPQHGAHLILRKL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27498503 27501627 + MELO3C030701.2.1 Cme04g01986 326247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01986 355 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS E-class P450 group I signature 153 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS E-class P450 group I signature 173 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS E-class P450 group I signature 303 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS E-class P450 group I signature 293 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 346 - -
Cme04g01986 355 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 296 305 IPR017972 GO:0005506|GO:0016705
Cme04g01986 355 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PANTHER CYTOCHROME P450 72A11-RELATED 1 346 - -
Cme04g01986 355 SUPERFAMILY Cytochrome P450 1 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 Pfam Cytochrome P450 1 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS P450 superfamily signature 294 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS P450 superfamily signature 164 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01986 355 PRINTS P450 superfamily signature 217 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01986 Cme-Chr4:27498503 Cme07g00429 Cme-Chr7:2834102 1.24E-162 dispersed
Cme04g01986 Cme-Chr4:27498503 Cme04g01987 Cme-Chr4:27504140 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01986 - - csv:101207867 620.928