Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g01987 ATGATGAATTGGAATTATAATTGGATATGGGGAGTGGGTTTGTTGTGGTTCTTGGGGTTACTGGGATTATGGGGATGGAGGATTGTGAATTGGGTTTGGCTTAGGCCAAAGAGGCTTGAGAAGTTGTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGGTTTCTGTTTGGTGATACAAAGGAAATTGGGGTGGCCGTCCGGCAAGCAAGATCGCAGTCCATGACCTTCTCCCATGATATTGCTTCACGAGCCACTCCTTCCTCTTATCCCACCATCCACAAATATGGTAAGGATTCTTTCACATGGATTGGAACAACACCTAGAGTGTATATAACAGAACCAGAACAAGTGAAGATTGTTTTCTCTCAAATAAATGATATTCGTAAGACATCTTCGTTTCCCCTTAGACGAAGAATGGGCAGTGGACTTGTAACTCTGGAGGGATCTAAATGGGCTAAACATAGAAAAATCATCAACCCTGCTTTTCACATGGAGAAGTTAAAGGAAATGTTTCCGGCATTCTCAAAGAGTTGTAGAGAAATGGTTAACAAATGGGAAAAGATGATTAGCGAAAAAGGAAGTGGTGAAATAGATGTGTGGCCTGATTTACAAAATTTGGCAGCTGATGTGATTTCTAGAACTGCTTTTGGAAGTAGTTACGATGAAGGGAAAAAAATCTTCCAACTCTTGAAAGAGTGGGCAGTGCTATTGATGTCATACCTAACTAAGAGAGCTTATTACATTCCAGGGGCGAGGTATATACCAACAAAATTAAACAAGAGGATGCAAGAGATTGATATGAAAATACGAGATCTGGTTCGGGGTATTATAAACAAAAGACAAAATGCTATGAAAAAAGGTGAAGCTTCCAAGAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGAAACTCAAATTGAAGAACAAAAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATTAGTGAATGCAGGCTTTTCTATTTTGCCGGTCAAGAAACCACAGCTGTATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACTCAGAGTGGCAAGATCGAGCAAGAGCAGAAGTCTTGGAGGTTTTTGGCAATAACAAGAAATTGGATTTCGATGGTCTAAGTCGTCTAAGAGTAGTAAGTATGATACTAAATGAAGTTCTCAGGTTGTACCCTCCAGTTGGAATGTTAGCTCGAGAGGTTCACAATGAAACAAAATTGGGGAATTTGACATTACCCAGTGGGGTATCAATAGGAATACCAATCTTAAGCATGCACCAAAATCCCAAAATATGGGGGGAAGATGTACTTGAATTCAACCCAGAAAGATTTTCGGAAGGAATTTCGAAAGCAACAAAAAATCAAGTATGCTTTATTCCTTTTGGATGGGGTCCTCGTATTTGCATTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCGATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCACAAATATCACTATTCAGCCACAACATGGAGCTCATCTCATCCTTCGTAAACTATAA 1578 39.29 MMNWNYNWIWGVGLLWFLGLLGLWGWRIVNWVWLRPKRLEKLLRQQGLAGNSYRFLFGDTKEIGVAVRQARSQSMTFSHDIASRATPSSYPTIHKYGKDSFTWIGTTPRVYITEPEQVKIVFSQINDIRKTSSFPLRRRMGSGLVTLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCREMVNKWEKMISEKGSGEIDVWPDLQNLAADVISRTAFGSSYDEGKKIFQLLKEWAVLLMSYLTKRAYYIPGARYIPTKLNKRMQEIDMKIRDLVRGIINKRQNAMKKGEASKNEDLLGILLESNETQIEEQKNKKDVGMSIEEVISECRLFYFAGQETTAVLLAWTMVLLGRYSEWQDRARAEVLEVFGNNKKLDFDGLSRLRVVSMILNEVLRLYPPVGMLAREVHNETKLGNLTLPSGVSIGIPILSMHQNPKIWGEDVLEFNPERFSEGISKATKNQVCFIPFGWGPRICIGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPITNITIQPQHGAHLILRKL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27504140 27509286 + MELO3C009864.2.1 Cme04g01987 326248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g01987 525 Pfam Cytochrome P450 95 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Cme04g01987 525 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 23 522 - -
Cme04g01987 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 522 - -
Cme04g01987 525 SUPERFAMILY Cytochrome P450 92 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 Gene3D Cytochrome P450 33 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g01987 525 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01987 Cme-Chr4:27504140 Cme07g00429 Cme-Chr7:2834102 0 dispersed
Cme04g01986 Cme-Chr4:27498503 Cme04g01987 Cme-Chr4:27504140 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g01987 - - csv:101207867 976.852