Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02021 ATGGAAGTCCTAAGAACAAGGGTCGGTGGCAGTGGGCTTCTGGTGGCGGTTGCGGCGGCAGTGGTGGTACTGCTGGCGTCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACTAATGTGAACTATAGTACCTGGGCTCAGGGAAAGCACTTCTACTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCCGGCCTTATTACTTCATAAGTGGCAAAGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTTGCCCATGAACGAAAAGAGCAGTGCTCTTAGATCTACCTACACTGGCCACACCCCATTCGTTTTAACCGCTGTTTTTGCCATTGCTGCTGTATTTGAAGCTTTCTCCCGGGTTTGGTAG 543 50.09 MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27730162 27731987 + MELO3C009833.2.1 Cme04g02021 326282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02021 180 PANTHER BLUE COPPER PROTEIN 14 172 IPR039391 GO:0009055
Cme04g02021 180 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
Cme04g02021 180 Gene3D - 32 135 IPR008972 -
Cme04g02021 180 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
Cme04g02021 180 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Cme04g02021 180 PANTHER LAMIN-LIKE PROTEIN 14 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01723 Cme-Chr4:24698574 Cme04g02021 Cme-Chr4:27730162 2.04E-30 dispersed
Cme04g02021 Cme-Chr4:27730162 Cme09g01685 Cme-Chr9:21535967 4.10E-20 dispersed
Cme04g02021 Cme-Chr4:27730162 Cme04g02023 Cme-Chr4:27735893 3.80E-18 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02021 - - csv:101210415 334.339