Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02070 ATGGGTTTCTTACCATCTCTCTCCAAACAGAGGGGTTTTATCATTTTCTTGAATCTCTCGTTTCTCTTAGTGGGTTCCGCTTTTTTGGTGAATCGGTTTCACTCCACAGAATCCCATTTCCATGTTCTTAACAAAAGCTCGAGAAGTATCCATGGCAACCCTCAGGAAGATTGCAAGAGTTTTATTGCTTTAACCGAGTCTGAAGCTAAGTGCTCTGTTCTTAAATCCAACAACCCCTGTCACACCCAAGGATATATAGATTATCTTTACATTTTCTATTGTGAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTAGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCAAAATTGTTGAATCTTTCCCCAACAATTGCCGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCTAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTCGGCGGAGCCTCGTTTGTTACCTGCGTCGTTGTTGGAATCATAAGTATTTTGCTGCGTCGGCGACGGATGAAGGTGAATAGGTCTGGCTTCATTAGAGATGTTTTGTTCTTTCTCTTGGTTCTTTTGTCTGTTTTCTTGATATTGCTTCATGGTCATATCAGTCTGTGGGGCTCCATTGCTTTTTCTTCCATGTATATTGTTTATGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGTTGAATTTTAGAAGTGACATCTGCGAACCCCTTTTGAAAGAGCCATCAAAGGATGAGTTTGAGGGTCGAAATGAACCGCAGGACAACAGTGACGATGATGACGATGTTAGAATCGATGTATATGATATCTGTTTTTGTCCAAGATTATCACCTTCTTGTCTTTTTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGAGTATATGCAGTTGCTTCAGTGATATTGGCCCCAGTTCTCTTATCTCTTCTATGGGCATTTCACCACCAGGGCGAGCCATCTCAATCTAACCTGATCATCTGTGTTGTCGCTTTGCTGCTCGGAATTAGTTTTGGGATTGTTGCATTTGTGACAACCGAGAATTCAAGCCCACCAAAGAAGTGCCTCTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTATATTGTAGCTCAAGAACTGATAGGCCTATTAGTTTCACTTAGCTACATAATGGGCATAAGCCCTTCAATTCTAGGACTTACCTTCCTGGCTTGGGGAAACTCTCTAGGGGATTTGGTTGCAAACGTGACCATGGCCTTGAACGGCGGTCAGCGAGGTGCCCAAATTGCCATCTCCGGCTGCTACGCTGGCCCCATCTTCAACACTCTGTTTGGCCTTGGAATGTCGCTTGTCGGCGCTTCATGGAAGAAGTATCCTGAGCCAATCGCCATTCCACCAGACCCTTATGTCATGGAGACATTGGGGCTGTTGGTAGGAGGGTTTGCTTTGGGCAGTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGA 1620 44.01 MGFLPSLSKQRGFIIFLNLSFLLVGSAFLVNRFHSTESHFHVLNKSSRSIHGNPQEDCKSFIALTESEAKCSVLKSNNPCHTQGYIDYLYIFYCEYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRRRMKVNRSGFIRDVLFFLLVLLSVFLILLHGHISLWGSIAFSSMYIVYVLVVYVSHAQWLNFRSDICEPLLKEPSKDEFEGRNEPQDNSDDDDDVRIDVYDICFCPRLSPSCLFFLRILEIPLYLPRRLTIPAIAEENWSRVYAVASVILAPVLLSLLWAFHHQGEPSQSNLIICVVALLLGISFGIVAFVTTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELIGLLVSLSYIMGISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPEPIAIPPDPYVMETLGLLVGGFALGSCGFAKERDEA 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28079990 28082597 - MELO3C009791.2.1 Cme04g02070 326331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02070 539 Gene3D - 139 264 IPR044880 -
Cme04g02070 539 Gene3D - 341 533 IPR044880 -
Cme04g02070 539 PANTHER CATION/CALCIUM EXCHANGER 2 7 528 - -
Cme04g02070 539 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016021|GO:0055085
Cme04g02070 539 Pfam Sodium/calcium exchanger protein 406 510 IPR004837 GO:0016021|GO:0055085
Cme04g02070 539 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00107 Cme-Chr2:796853 Cme04g02070 Cme-Chr4:28079990 1.42E-45 dispersed
Cme02g00310 Cme-Chr2:2569289 Cme04g02070 Cme-Chr4:28079990 1.53E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02070 K13754 - csv:101204766 976.081